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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170313236
CESN01002492
185921
Bacteroidota
GTC
Asp
>WENV170313241
CESN01002647
185921
Bacteroidota
GTC
Asp
>WENV170313261
CESN01004409
190649
Bacteroidota
GTT
Asn
>WENV170313289
CESN01007221
59355
Bacteroidota
GCT
Ser
>WENV170313537
CESN01028906
190649
Bacteroidota
GTT
Asn
>WENV170313575
CESN01032192
270933
Bacteroidota
CAT
Met
>WENV170313627
CESN01038156
236125
Bacteroidota
GAA
Phe
>WENV170313712
CESN01047249
127414
Bacteroidota
TGG
Pro
>WENV170313735
CESN01050547
273242
Bacteroidota
CCA
Trp
>WENV170313783
CESN01055039
238764
Bacteroidota
>WENV170313834
CESN01061382
127414
Bacteroidota
TGG
Pro
>WENV170313938
CESN01072530
80676
Bacteroidota
GTA
Tyr
>WENV170313946
CESN01073562
236125
Bacteroidota
GAA
Phe
>WENV170314039
CESN01084909
145555
Bacteroidota
GTC
Asp
>WENV170314072
CESN01088262
246641
Bacteroidota
GAA
Phe
>WENV170314073
CESN01088440
127449
Bacteroidota
TAC
Val
>WENV170314115
CESN01091918
127414
Bacteroidota
TGG
Pro
>WENV170314215
CESN01100845
235802
Bacteroidota
CAT
Met
>WENV170314239
CESN01102927
95727
Bacteroidota
TAG
Leu
>WENV170314252
CESN01103497
236125
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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