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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170335708
CESZ01091411
339737
Alphaproteobacteria
GAC
Val
>WENV170334765
CESZ01006271
10665
Alphaproteobacteria
GCT
Ser
>WENV170334964
CESZ01021836
113700
Alphaproteobacteria
>WENV170335592
CESZ01077487
144964
Alphaproteobacteria
TGG
Pro
>WENV170335461
CESZ01065185
338282
Alphaproteobacteria
GTT
Asn
>WENV170335462
CESZ01065187
147083
Alphaproteobacteria
GGG
Pro
>WENV170335710
CESZ01091857
147083
Alphaproteobacteria
GGG
Pro
>WENV170335602
CESZ01078664
339846
Alphaproteobacteria
GAC
Val
>WENV170335977
CESZ01112554
82652
Alphaproteobacteria
GTA
Tyr
>WENV170335840
CESZ01102985
339750
Alphaproteobacteria
GGT
Thr
>WENV170335596
CESZ01077727
159427
Alphaproteobacteria
GTG
His
>WENV170335175
CESZ01037836
159427
Alphaproteobacteria
GTG
His
>WENV170335272
CESZ01046071
341164
Alphaproteobacteria
GCC
Gly
>WENV170335151
CESZ01035231
160158
Alphaproteobacteria
GAT
Ile
>WENV170335412
CESZ01060822
147289
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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