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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170334699
CESZ01000868
323860
Alphaproteobacteria
CCA
Trp
>WENV170334765
CESZ01006271
12053
Alphaproteobacteria
GCT
Ser
>WENV170334949
CESZ01020821
372766
Alphaproteobacteria
TTG
Gln
>WENV170334964
CESZ01021836
125595
Alphaproteobacteria
>WENV170335319
CESZ01050767
166599
Alphaproteobacteria
CAT
Met
>WENV170335333
CESZ01052227
259585
Alphaproteobacteria
CCA
Trp
>WENV170335412
CESZ01060822
160197
Alphaproteobacteria
GTC
Asp
>WENV170335439
CESZ01063238
114633
Alphaproteobacteria
TAG
Leu
>WENV170335462
CESZ01065187
205335
Alphaproteobacteria
GGG
Pro
>WENV170335613
CESZ01080425
207103
Alphaproteobacteria
GTG
His
>WENV170335667
CESZ01086499
202800
Alphaproteobacteria
ACG
Arg
>WENV170335840
CESZ01102985
393349
Alphaproteobacteria
GGT
Thr
>WENV170335891
CESZ01106831
166599
Alphaproteobacteria
CAT
Met
>WENV170336168
CESZ01190164
160575
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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