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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170336022
CESZ01134849
235887
Gammaproteobacteria
GTG
His
>WENV170335952
CESZ01109662
338234
Gammaproteobacteria
GAC
Val
>WENV170334783
CESZ01008201
244202
Gammaproteobacteria
TTT
Lys
>WENV170335338
CESZ01052996
241476
Gammaproteobacteria
TTT
Lys
>WENV170335025
CESZ01025707
145260
Gammaproteobacteria
CAT
Met
>WENV170335332
CESZ01052192
160030
Gammaproteobacteria
GGG
Pro
>WENV170334986
CESZ01023346
145196
Gammaproteobacteria
CAT
Met
>WENV170335587
CESZ01077305
147647
Gammaproteobacteria
CAT
Met
>WENV170335950
CESZ01109537
247159
Gammaproteobacteria
TTC
Glu
>WENV170335401
CESZ01060155
59440
Gammaproteobacteria
TAA
Leu
>WENV170335956
CESZ01109766
240619
Gammaproteobacteria
TGT
Thr
>WENV170335392
CESZ01059333
240619
Gammaproteobacteria
TGT
Thr
>WENV170334974
CESZ01022215
149036
Gammaproteobacteria
CCA
Trp
>WENV170335779
CESZ01098210
245602
Gammaproteobacteria
TTT
Lys
>WENV170335499
CESZ01068541
245602
Gammaproteobacteria
TTT
Lys
>WENV170335385
CESZ01058795
148148
Gammaproteobacteria
GAC
Val
>WENV170335400
CESZ01060155
412799
Gammaproteobacteria
GCA
Cys
>WENV170335609
CESZ01079926
6976
Gammaproteobacteria
GCT
Ser
>WENV170335541
CESZ01072488
252289
Gammaproteobacteria
TTT
Lys
>WENV170336189
CESZ01196519
411766
Gammaproteobacteria
GCA
Cys
>WENV170335323
CESZ01050862
240084
Gammaproteobacteria
GGT
Thr
>WENV170334786
CESZ01008238
10767
Gammaproteobacteria
GCT
Ser
>WENV170335335
CESZ01052435
148440
Gammaproteobacteria
>WENV170335884
CESZ01106668
145713
Gammaproteobacteria
CAT
Met
>WENV170335819
CESZ01101435
241136
Gammaproteobacteria
TTG
Gln
>WENV170335880
CESZ01106486
235886
Gammaproteobacteria
TTC
Glu
>WENV170336088
CESZ01164660
243485
Gammaproteobacteria
TGT
Thr
>WENV170334810
CESZ01009669
237421
Gammaproteobacteria
TGT
Thr
>WENV170335599
CESZ01078162
247088
Gammaproteobacteria
CCA
Trp
>WENV170336040
CESZ01142204
237159
Gammaproteobacteria
GTG
His
>WENV170335373
CESZ01057394
411735
Gammaproteobacteria
GCA
Cys
>WENV170336039
CESZ01142204
150297
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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