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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170339158
CETB01097727
338234
Gammaproteobacteria
GAC
Val
>WENV170338499
CETB01036863
235341
Gammaproteobacteria
TGT
Thr
>WENV170338512
CETB01038376
149035
Gammaproteobacteria
CCG
Arg
>WENV170340326
CETB01330936
283668
Gammaproteobacteria
TTT
Lys
>WENV170339959
CETB01170694
290337
Gammaproteobacteria
TAC
Val
>WENV170339906
CETB01168154
23369
Gammaproteobacteria
GCT
Ser
>WENV170340312
CETB01326118
197713
Gammaproteobacteria
CAT
Met
>WENV170338056
CETB01000904
185163
Gammaproteobacteria
ACG
Arg
>WENV170338055
CETB01000904
185163
Gammaproteobacteria
ACG
Arg
>WENV170339185
CETB01100636
373590
Gammaproteobacteria
TTG
Gln
>WENV170338238
CETB01016735
149036
Gammaproteobacteria
CCA
Trp
>WENV170338057
CETB01000904
149036
Gammaproteobacteria
CCA
Trp
>WENV170338272
CETB01018480
322642
Gammaproteobacteria
GGT
Thr
>WENV170338696
CETB01052203
148148
Gammaproteobacteria
GAC
Val
>WENV170338082
CETB01002219
412799
Gammaproteobacteria
GCA
Cys
>WENV170338349
CETB01025105
340801
Gammaproteobacteria
CCT
Arg
>WENV170338502
CETB01036863
235344
Gammaproteobacteria
GGT
Thr
>WENV170340381
CETB01342343
235339
Gammaproteobacteria
GTG
His
>WENV170338054
CETB01000904
10767
Gammaproteobacteria
GCT
Ser
>WENV170338514
CETB01038502
173040
Gammaproteobacteria
GAC
Val
>WENV170340278
CETB01306387
341782
Gammaproteobacteria
TTG
Gln
>WENV170340385
CETB01343616
236973
Gammaproteobacteria
GTT
Asn
>WENV170338083
CETB01002219
77137
Gammaproteobacteria
TAA
Leu
>WENV170338050
CETB01000810
250885
Gammaproteobacteria
TGC
Ala
>WENV170338559
CETB01041433
151889
Gammaproteobacteria
CAT
Met
>WENV170338549
CETB01040765
59658
Gammaproteobacteria
CAA
Leu
>WENV170338635
CETB01047944
149037
Gammaproteobacteria
GAC
Val
>WENV170340470
CETB01358561
45411
Gammaproteobacteria
GGA
Ser
>WENV170339137
CETB01096586
276263
Gammaproteobacteria
TGC
Ala
>WENV170340460
CETB01358171
144813
Gammaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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