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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170344218
CETE01079330
113631
Gammaproteobacteria
GTA
Tyr
>WENV170343571
CETE01020860
149035
Gammaproteobacteria
CCG
Arg
>WENV170343534
CETE01017369
160030
Gammaproteobacteria
GGG
Pro
>WENV170343877
CETE01046008
171935
Gammaproteobacteria
ACG
Arg
>WENV170343408
CETE01006928
185163
Gammaproteobacteria
ACG
Arg
>WENV170343409
CETE01006928
185163
Gammaproteobacteria
ACG
Arg
>WENV170344656
CETE01125005
154268
Gammaproteobacteria
ACG
Arg
>WENV170343948
CETE01051014
149036
Gammaproteobacteria
CCA
Trp
>WENV170343920
CETE01049235
149036
Gammaproteobacteria
CCA
Trp
>WENV170344219
CETE01079330
338534
Gammaproteobacteria
TCC
Gly
>WENV170344754
CETE01133796
245602
Gammaproteobacteria
TTT
Lys
>WENV170343741
CETE01033209
145261
Gammaproteobacteria
CAT
Met
>WENV170344120
CETE01068409
69672
Gammaproteobacteria
TAA
Leu
>WENV170343859
CETE01044773
412799
Gammaproteobacteria
GCA
Cys
>WENV170343435
CETE01009496
340801
Gammaproteobacteria
CCT
Arg
>WENV170344689
CETE01126875
411766
Gammaproteobacteria
GCA
Cys
>WENV170343815
CETE01040869
59830
Gammaproteobacteria
CAA
Leu
>WENV170343768
CETE01035829
240084
Gammaproteobacteria
GGT
Thr
>WENV170343407
CETE01006928
10767
Gammaproteobacteria
GCT
Ser
>WENV170343816
CETE01041054
173040
Gammaproteobacteria
GAC
Val
>WENV170343484
CETE01013216
195303
Gammaproteobacteria
GAT
Ile
>WENV170343562
CETE01020086
149037
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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