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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170358080
CETK01051360
435870
Alphaproteobacteria
GCA
Cys
>WENV170358006
CETK01042095
113700
Alphaproteobacteria
>WENV170358800
CETK01140977
338282
Alphaproteobacteria
GTT
Asn
>WENV170358289
CETK01076917
165860
Alphaproteobacteria
TGG
Pro
>WENV170358366
CETK01083753
283763
Alphaproteobacteria
TGC
Ala
>WENV170357958
CETK01037729
340106
Alphaproteobacteria
GCC
Gly
>WENV170358845
CETK01145801
167926
Alphaproteobacteria
CAT
Met
>WENV170358761
CETK01136734
167926
Alphaproteobacteria
CAT
Met
>WENV170357565
CETK01009908
167926
Alphaproteobacteria
CAT
Met
>WENV170357541
CETK01008398
280207
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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