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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170363618
CETM01174740
365250
Alphaproteobacteria
GCC
Gly
>WENV170364787
CETM01432866
237493
Alphaproteobacteria
CCA
Trp
>WENV170363420
CETM01158674
257573
Alphaproteobacteria
GAA
Phe
>WENV170363419
CETM01158635
146875
Alphaproteobacteria
GTG
His
>WENV170361641
CETM01020356
421153
Alphaproteobacteria
>WENV170363971
CETM01197109
147577
Alphaproteobacteria
CCG
Arg
>WENV170363507
CETM01165416
199865
Alphaproteobacteria
CAT
Met
>WENV170364496
CETM01308572
95928
Alphaproteobacteria
TAG
Leu
>WENV170363451
CETM01161636
162801
Alphaproteobacteria
GTG
His
>WENV170362838
CETM01104078
74116
Alphaproteobacteria
CAG
Leu
>WENV170362565
CETM01081270
252148
Alphaproteobacteria
TGT
Thr
>WENV170362435
CETM01071439
161002
Alphaproteobacteria
GTG
His
>WENV170363127
CETM01128498
289655
Alphaproteobacteria
GGC
Ala
>WENV170364583
CETM01348495
163860
Alphaproteobacteria
GGG
Pro
>WENV170363015
CETM01119212
160158
Alphaproteobacteria
GAT
Ile
>WENV170363025
CETM01119930
369678
Alphaproteobacteria
GGT
Thr
>WENV170362835
CETM01103478
29831
Alphaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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