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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170363948
CETM01196367
179913
Alphaproteobacteria
CCT
Arg
>WENV170364664
CETM01386103
396582
Alphaproteobacteria
GAC
Val
>WENV170363508
CETM01165416
160201
Alphaproteobacteria
TGG
Pro
>WENV170364551
CETM01336782
369566
Alphaproteobacteria
GGT
Thr
>WENV170362835
CETM01103478
31820
Alphaproteobacteria
TGA
Ser
>WENV170361641
CETM01020356
448545
Alphaproteobacteria
>WENV170361991
CETM01040193
107829
Alphaproteobacteria
CAA
Leu
>WENV170363146
CETM01131413
382630
Alphaproteobacteria
GAC
Val
>WENV170363451
CETM01161636
173035
Alphaproteobacteria
GTG
His
>WENV170362410
CETM01070125
160575
Alphaproteobacteria
CCT
Arg
>WENV170364564
CETM01343291
372766
Alphaproteobacteria
TTG
Gln
>WENV170364583
CETM01348495
178940
Alphaproteobacteria
GGG
Pro
>WENV170363701
CETM01181825
105419
Alphaproteobacteria
TAA
Leu
>WENV170361957
CETM01037382
262836
Alphaproteobacteria
TAC
Val
>WENV170363114
CETM01127018
278105
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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