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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170371361
CETS01005226
295152
Actinomycetota
GTT
Asn
>WENV170371681
CETS01030729
240825
Actinomycetota
GTG
His
>WENV170372401
CETS01092096
75539
Actinomycetota
CAG
Leu
>WENV170373458
CETS01287197
75539
Actinomycetota
CAG
Leu
>WENV170371310
CETS01002201
45926
Actinomycetota
TGA
Ser
>WENV170373268
CETS01233606
240960
Actinomycetota
TTC
Glu
>WENV170373132
CETS01171199
162442
Actinomycetota
GAT
Ile
>WENV170373343
CETS01256563
16376
Actinomycetota
CGA
Ser
>WENV170373207
CETS01206708
4672
Actinomycetota
GCT
Ser
>WENV170372702
CETS01125605
236214
Actinomycetota
CCA
Trp
>WENV170372326
CETS01083856
236214
Actinomycetota
CCA
Trp
>WENV170371768
CETS01038053
105186
Actinomycetota
TAG
Leu
>WENV170371618
CETS01025120
105186
Actinomycetota
TAG
Leu
>WENV170372254
CETS01077158
24115
Actinomycetota
CGA
Ser
>WENV170372328
CETS01084193
310739
Actinomycetota
TTT
Lys
>WENV170372869
CETS01142657
11546
Actinomycetota
GCT
Ser
>WENV170373123
CETS01167349
152216
Actinomycetota
GAT
Ile
>WENV170373193
CETS01198075
392804
Actinomycetota
TTG
Gln
>WENV170372999
CETS01155589
63783
Actinomycetota
CAG
Leu
>WENV170373070
CETS01160309
244227
Actinomycetota
CGT
Thr
>WENV170372614
CETS01115690
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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