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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170392415
CEUB01036169
158433
Gammaproteobacteria
ACG
Arg
>WENV170393531
CEUB01197841
195797
Gammaproteobacteria
ACG
Arg
>WENV170393568
CEUB01201576
261853
Gammaproteobacteria
GTT
Asn
>WENV170392755
CEUB01076312
229608
Gammaproteobacteria
CAT
Met
>WENV170393734
CEUB01260753
50077
Gammaproteobacteria
GGA
Ser
>WENV170393494
CEUB01193626
272540
Gammaproteobacteria
GTT
Asn
>WENV170392848
CEUB01088489
126541
Gammaproteobacteria
GTA
Tyr
>WENV170392970
CEUB01106900
259140
Gammaproteobacteria
TGC
Ala
>WENV170392840
CEUB01087224
128911
Gammaproteobacteria
GTA
Tyr
>WENV170392816
CEUB01083600
275207
Gammaproteobacteria
GGT
Thr
>WENV170392562
CEUB01050884
261154
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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