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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170392981
CEUB01108159
149035
Gammaproteobacteria
CCG
Arg
>WENV170392226
CEUB01015937
185163
Gammaproteobacteria
ACG
Arg
>WENV170393514
CEUB01195326
17329
Gammaproteobacteria
TGA
Ser
>WENV170392222
CEUB01015802
412799
Gammaproteobacteria
GCA
Cys
>WENV170393734
CEUB01260753
52727
Gammaproteobacteria
GGA
Ser
>WENV170393343
CEUB01167758
247974
Gammaproteobacteria
CCA
Trp
>WENV170392544
CEUB01048775
59830
Gammaproteobacteria
CAA
Leu
>WENV170392225
CEUB01015937
10767
Gammaproteobacteria
GCT
Ser
>WENV170393687
CEUB01222544
341782
Gammaproteobacteria
TTG
Gln
>WENV170392223
CEUB01015802
77137
Gammaproteobacteria
TAA
Leu
>WENV170392755
CEUB01076312
145713
Gammaproteobacteria
CAT
Met
>WENV170392212
CEUB01015374
411842
Gammaproteobacteria
GCA
Cys
>WENV170392562
CEUB01050884
250885
Gammaproteobacteria
TGC
Ala
>WENV170392847
CEUB01088489
237421
Gammaproteobacteria
TGT
Thr
>WENV170392415
CEUB01036169
203054
Gammaproteobacteria
ACG
Arg
>WENV170393188
CEUB01137963
198797
Gammaproteobacteria
TGG
Pro
>WENV170392211
CEUB01015374
270352
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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