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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170419169
CEUM01103910
325201
Bacteroidota
>WENV170419442
CEUM01127311
325201
Bacteroidota
>WENV170419109
CEUM01097754
139500
Bacteroidota
TGG
Pro
>WENV170419789
CEUM01137751
109317
Bacteroidota
CAA
Leu
>WENV170419456
CEUM01128245
300555
Bacteroidota
CCA
Trp
>WENV170418319
CEUM01033379
302353
Bacteroidota
TTG
Gln
>WENV170418378
CEUM01037370
116954
Bacteroidota
TAG
Leu
>WENV170418865
CEUM01074270
106605
Bacteroidota
CAA
Leu
>WENV170417875
CEUM01008370
139484
Bacteroidota
TAC
Val
>WENV170418866
CEUM01074318
139484
Bacteroidota
TAC
Val
>WENV170418493
CEUM01045615
105619
Bacteroidota
GTA
Tyr
>WENV170418602
CEUM01054488
211884
Bacteroidota
TGC
Ala
>WENV170418922
CEUM01080015
57357
Bacteroidota
TGA
Ser
>WENV170418107
CEUM01021806
50342
Bacteroidota
TGA
Ser
>WENV170418848
CEUM01072766
50342
Bacteroidota
TGA
Ser
>WENV170418716
CEUM01062314
263627
Bacteroidota
TTG
Gln
>WENV170418959
CEUM01083849
263627
Bacteroidota
TTG
Gln
>WENV170418069
CEUM01019094
177164
Bacteroidota
GTC
Asp
>WENV170418949
CEUM01082878
177164
Bacteroidota
GTC
Asp
>WENV170420170
CEUM01298201
105473
Bacteroidota
TAG
Leu
>WENV170419762
CEUM01137389
257687
Bacteroidota
TTT
Lys
>WENV170419763
CEUM01137400
119207
Bacteroidota
TAG
Leu
>WENV170420278
CEUM01319778
214919
Bacteroidota
GTG
His
>WENV170417972
CEUM01014852
321470
Bacteroidota
GAA
Phe
>WENV170418714
CEUM01062212
321470
Bacteroidota
GAA
Phe
>WENV170419007
CEUM01087806
50353
Bacteroidota
TGA
Ser
>WENV170418355
CEUM01035769
371968
Bacteroidota
CCT
Arg
>WENV170417890
CEUM01009705
24600
Bacteroidota
GGA
Ser
>WENV170418503
CEUM01046556
263886
Bacteroidota
TTG
Gln
>WENV170420124
CEUM01284457
304848
Bacteroidota
GCC
Gly
>WENV170418509
CEUM01046985
152195
Bacteroidota
TAC
Val
>WENV170417984
CEUM01015598
310118
Bacteroidota
CCA
Trp
>WENV170418529
CEUM01048247
310118
Bacteroidota
CCA
Trp
>WENV170418546
CEUM01050186
310118
Bacteroidota
CCA
Trp
>WENV170419560
CEUM01132291
310118
Bacteroidota
CCA
Trp
>WENV170418380
CEUM01037705
160456
Bacteroidota
GAT
Ile
>WENV170419896
CEUM01186984
65366
Bacteroidota
GAG
Leu
>WENV170417947
CEUM01012892
68352
Bacteroidota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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