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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170420041
CEUM01253772
256881
Gammaproteobacteria
GTG
His
>WENV170419713
CEUM01136596
174334
Gammaproteobacteria
>WENV170418190
CEUM01026036
67514
Gammaproteobacteria
TAA
Leu
>WENV170418985
CEUM01085343
18367
Gammaproteobacteria
GCT
Ser
>WENV170419872
CEUM01176404
309075
Gammaproteobacteria
GTT
Asn
>WENV170419331
CEUM01119179
198668
Gammaproteobacteria
>WENV170419884
CEUM01183231
368930
Gammaproteobacteria
>WENV170419396
CEUM01124184
263230
Gammaproteobacteria
TTT
Lys
>WENV170419575
CEUM01132805
263230
Gammaproteobacteria
TTT
Lys
>WENV170418458
CEUM01042583
319314
Gammaproteobacteria
TGT
Thr
>WENV170417887
CEUM01009569
305458
Gammaproteobacteria
TAC
Val
>WENV170417941
CEUM01012688
230238
Gammaproteobacteria
TGG
Pro
>WENV170418062
CEUM01018854
231877
Gammaproteobacteria
GAT
Ile
>WENV170418776
CEUM01066331
221435
Gammaproteobacteria
GGG
Pro
>WENV170418946
CEUM01082485
65736
Gammaproteobacteria
TAA
Leu
>WENV170419599
CEUM01134217
65736
Gammaproteobacteria
TAA
Leu
>WENV170419917
CEUM01198019
105723
Gammaproteobacteria
GAG
Leu
>WENV170417976
CEUM01015148
172986
Gammaproteobacteria
CCA
Trp
>WENV170418765
CEUM01065497
172986
Gammaproteobacteria
CCA
Trp
>WENV170419069
CEUM01093282
172986
Gammaproteobacteria
CCA
Trp
>WENV170419695
CEUM01136065
172986
Gammaproteobacteria
CCA
Trp
>WENV170420009
CEUM01238899
412618
Gammaproteobacteria
TTG
Gln
>WENV170419189
CEUM01105954
325641
Gammaproteobacteria
CCA
Trp
>WENV170419692
CEUM01135999
263086
Gammaproteobacteria
GTT
Asn
>WENV170420042
CEUM01253772
106574
Gammaproteobacteria
TAG
Leu
>WENV170418054
CEUM01018422
107578
Gammaproteobacteria
GAG
Leu
>WENV170418831
CEUM01071213
259140
Gammaproteobacteria
TGC
Ala
>WENV170418438
CEUM01041551
323307
Gammaproteobacteria
GGT
Thr
>WENV170418239
CEUM01029164
161327
Gammaproteobacteria
ACG
Arg
>WENV170418986
CEUM01085343
214281
Gammaproteobacteria
ACG
Arg
>WENV170419452
CEUM01128048
324336
Gammaproteobacteria
GTG
His
>WENV170417782
CEUM01002529
471753
Gammaproteobacteria
GCA
Cys
>WENV170418323
CEUM01033613
471753
Gammaproteobacteria
GCA
Cys
>WENV170418437
CEUM01041551
105812
Gammaproteobacteria
GTA
Tyr
>WENV170418932
CEUM01081148
26256
Gammaproteobacteria
CGA
Ser
>WENV170418189
CEUM01026036
462237
Gammaproteobacteria
GCA
Cys
>WENV170420302
CEUM01323412
65858
Gammaproteobacteria
CAA
Leu
>WENV170418436
CEUM01041519
265381
Gammaproteobacteria
GTT
Asn
>WENV170419127
CEUM01099119
449736
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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