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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170418458
CEUM01042583
312287
Gammaproteobacteria
TGT
Thr
>WENV170420000
CEUM01233177
299821
Gammaproteobacteria
TTC
Glu
>WENV170419452
CEUM01128048
235887
Gammaproteobacteria
GTG
His
>WENV170419116
CEUM01098080
313881
Gammaproteobacteria
GGC
Ala
>WENV170417746
CEUM01000218
199859
Gammaproteobacteria
CAT
Met
>WENV170417941
CEUM01012688
146435
Gammaproteobacteria
TGG
Pro
>WENV170419396
CEUM01124184
279385
Gammaproteobacteria
TTT
Lys
>WENV170419432
CEUM01126727
149035
Gammaproteobacteria
CCG
Arg
>WENV170419383
CEUM01123077
61925
Gammaproteobacteria
TAA
Leu
>WENV170418776
CEUM01066331
160030
Gammaproteobacteria
GGG
Pro
>WENV170418190
CEUM01026036
59211
Gammaproteobacteria
TAA
Leu
>WENV170418239
CEUM01029164
154268
Gammaproteobacteria
ACG
Arg
>WENV170419054
CEUM01091971
154268
Gammaproteobacteria
ACG
Arg
>WENV170419561
CEUM01132297
240642
Gammaproteobacteria
GTT
Asn
>WENV170419695
CEUM01136065
149036
Gammaproteobacteria
CCA
Trp
>WENV170419069
CEUM01093282
149036
Gammaproteobacteria
CCA
Trp
>WENV170418765
CEUM01065497
149036
Gammaproteobacteria
CCA
Trp
>WENV170417976
CEUM01015148
149036
Gammaproteobacteria
CCA
Trp
>WENV170419575
CEUM01132805
245602
Gammaproteobacteria
TTT
Lys
>WENV170418438
CEUM01041551
322642
Gammaproteobacteria
GGT
Thr
>WENV170420043
CEUM01253853
340801
Gammaproteobacteria
CCT
Arg
>WENV170419127
CEUM01099119
426403
Gammaproteobacteria
GCA
Cys
>WENV170418086
CEUM01020089
289927
Gammaproteobacteria
GAA
Phe
>WENV170417921
CEUM01011467
202944
Gammaproteobacteria
TGG
Pro
>WENV170418986
CEUM01085343
199268
Gammaproteobacteria
ACG
Arg
>WENV170420041
CEUM01253772
269152
Gammaproteobacteria
GTG
His
>WENV170417887
CEUM01009569
319098
Gammaproteobacteria
TAC
Val
>WENV170420293
CEUM01321690
341782
Gammaproteobacteria
TTG
Gln
>WENV170419882
CEUM01181580
341782
Gammaproteobacteria
TTG
Gln
>WENV170419907
CEUM01194963
410215
Gammaproteobacteria
TTG
Gln
>WENV170417782
CEUM01002529
412373
Gammaproteobacteria
GCA
Cys
>WENV170419854
CEUM01165031
319100
Gammaproteobacteria
GGT
Thr
>WENV170418062
CEUM01018854
195303
Gammaproteobacteria
GAT
Ile
>WENV170419168
CEUM01103890
128930
Gammaproteobacteria
GTC
Asp
>WENV170420302
CEUM01323412
59658
Gammaproteobacteria
CAA
Leu
>WENV170420379
CEUM01328038
237421
Gammaproteobacteria
TGT
Thr
>WENV170418087
CEUM01020161
149037
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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