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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170417767
CEUM01001982
256453
Thermodesulfobacteriota
TGC
Ala
>WENV170417765
CEUM01001982
12283
Thermodesulfobacteriota
TGA
Ser
>WENV170419195
CEUM01106584
256456
Thermodesulfobacteriota
CAT
Met
>WENV170419477
CEUM01129283
83353
Thermodesulfobacteriota
GTA
Tyr
>WENV170419554
CEUM01132036
154121
Thermodesulfobacteriota
GTC
Asp
>WENV170419615
CEUM01134568
165016
Thermodesulfobacteriota
CGG
Pro
>WENV170419413
CEUM01125723
269764
Thermodesulfobacteriota
GGC
Ala
>WENV170418527
CEUM01048080
269764
Thermodesulfobacteriota
GGC
Ala
>WENV170419814
CEUM01137962
256451
Thermodesulfobacteriota
CTT
Lys
>WENV170419066
CEUM01093078
64858
Thermodesulfobacteriota
CAG
Leu
>WENV170419774
CEUM01137570
351789
Thermodesulfobacteriota
GAC
Val
>WENV170419813
CEUM01137962
256448
Thermodesulfobacteriota
GTT
Asn
>WENV170419479
CEUM01129283
174404
Thermodesulfobacteriota
CCA
Trp
>WENV170419212
CEUM01108529
99359
Thermodesulfobacteriota
TAG
Leu
>WENV170418631
CEUM01056742
194956
Thermodesulfobacteriota
GGG
Pro
>WENV170419703
CEUM01136299
256452
Thermodesulfobacteriota
CTC
Glu
>WENV170418951
CEUM01083224
62195
Thermodesulfobacteriota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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