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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170417767
CEUM01001982
278627
Thermodesulfobacteriota
TGC
Ala
>WENV170419195
CEUM01106584
278058
Thermodesulfobacteriota
>WENV170419805
CEUM01137887
313652
Thermodesulfobacteriota
CGT
Thr
>WENV170419813
CEUM01137962
317329
Thermodesulfobacteriota
GTT
Asn
>WENV170419212
CEUM01108529
109070
Thermodesulfobacteriota
TAG
Leu
>WENV170419066
CEUM01093078
69111
Thermodesulfobacteriota
CAG
Leu
>WENV170419774
CEUM01137570
382502
Thermodesulfobacteriota
GAC
Val
>WENV170419772
CEUM01137570
279848
Thermodesulfobacteriota
GTG
His
>WENV170417765
CEUM01001982
13195
Thermodesulfobacteriota
TGA
Ser
>WENV170417990
CEUM01015728
178388
Thermodesulfobacteriota
CCG
Arg
>WENV170419814
CEUM01137962
260533
Thermodesulfobacteriota
CTT
Lys
>WENV170419615
CEUM01134568
175265
Thermodesulfobacteriota
CGG
Pro
>WENV170418750
CEUM01064556
141141
Thermodesulfobacteriota
>WENV170418751
CEUM01064556
141141
Thermodesulfobacteriota
>WENV170418749
CEUM01064556
380848
Thermodesulfobacteriota
CTG
Gln
>WENV170419756
CEUM01137254
178384
Thermodesulfobacteriota
ACG
Arg
>WENV170419477
CEUM01129283
90979
Thermodesulfobacteriota
GTA
Tyr
>WENV170419479
CEUM01129283
179279
Thermodesulfobacteriota
CCA
Trp
>WENV170419554
CEUM01132036
176036
Thermodesulfobacteriota
GTC
Asp
>WENV170419689
CEUM01135824
278634
Thermodesulfobacteriota
GAA
Phe
>WENV170419712
CEUM01136504
278631
Thermodesulfobacteriota
CCC
Gly
>WENV170418630
CEUM01056742
212017
Thermodesulfobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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