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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170440844
CEUV01133370
12283
Thermodesulfobacteriota
TGA
Ser
>WENV170441003
CEUV01142583
256456
Thermodesulfobacteriota
CAT
Met
>WENV170439038
CEUV01009454
83353
Thermodesulfobacteriota
GTA
Tyr
>WENV170440566
CEUV01110953
154121
Thermodesulfobacteriota
GTC
Asp
>WENV170440749
CEUV01126383
165016
Thermodesulfobacteriota
CGG
Pro
>WENV170441908
CEUV01298121
256451
Thermodesulfobacteriota
CTT
Lys
>WENV170439471
CEUV01034334
64858
Thermodesulfobacteriota
CAG
Leu
>WENV170440368
CEUV01092969
345926
Thermodesulfobacteriota
CTG
Gln
>WENV170441039
CEUV01144953
351789
Thermodesulfobacteriota
GAC
Val
>WENV170440314
CEUV01088424
256448
Thermodesulfobacteriota
GTT
Asn
>WENV170439040
CEUV01009454
174404
Thermodesulfobacteriota
CCA
Trp
>WENV170441681
CEUV01261033
99359
Thermodesulfobacteriota
TAG
Leu
>WENV170439798
CEUV01052254
194956
Thermodesulfobacteriota
GGG
Pro
>WENV170441295
CEUV01154691
256452
Thermodesulfobacteriota
CTC
Glu
>WENV170440341
CEUV01090466
62195
Thermodesulfobacteriota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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