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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170467314
CEVE01130293
171373
Bacteroidota
GTG
His
>WENV170466749
CEVE01080658
139505
Bacteroidota
TAC
Val
>WENV170467752
CEVE01260970
170034
Bacteroidota
>WENV170465918
CEVE01010484
116954
Bacteroidota
TAG
Leu
>WENV170467175
CEVE01121386
204029
Bacteroidota
GTT
Asn
>WENV170465991
CEVE01015390
139484
Bacteroidota
TAC
Val
>WENV170466777
CEVE01082769
57357
Bacteroidota
TGA
Ser
>WENV170467067
CEVE01112816
95721
Bacteroidota
GTA
Tyr
>WENV170466462
CEVE01054008
56450
Bacteroidota
TGA
Ser
>WENV170466820
CEVE01086901
263627
Bacteroidota
TTG
Gln
>WENV170466140
CEVE01024503
49783
Bacteroidota
TGA
Ser
>WENV170466779
CEVE01082894
49783
Bacteroidota
TGA
Ser
>WENV170466486
CEVE01056418
177164
Bacteroidota
GTC
Asp
>WENV170467112
CEVE01117227
177164
Bacteroidota
GTC
Asp
>WENV170467591
CEVE01187847
370201
Bacteroidota
TTG
Gln
>WENV170467713
CEVE01246482
164620
Bacteroidota
GTG
His
>WENV170466915
CEVE01097487
179730
Bacteroidota
TCT
Arg
>WENV170467687
CEVE01232960
371968
Bacteroidota
CCT
Arg
>WENV170465835
CEVE01004245
168483
Bacteroidota
GTT
Asn
>WENV170466835
CEVE01088135
168483
Bacteroidota
GTT
Asn
>WENV170467022
CEVE01107489
304848
Bacteroidota
GCC
Gly
>WENV170466952
CEVE01100813
310118
Bacteroidota
CCA
Trp
>WENV170466905
CEVE01096336
23145
Bacteroidota
GGA
Ser
>WENV170467013
CEVE01107143
18750
Bacteroidota
GGA
Ser
>WENV170467414
CEVE01133922
65366
Bacteroidota
GAG
Leu
>WENV170466112
CEVE01022769
311172
Bacteroidota
GAA
Phe
>WENV170467774
CEVE01268595
79298
Bacteroidota
GCT
Ser
>WENV170466810
CEVE01085638
301008
Bacteroidota
TTG
Gln
>WENV170467042
CEVE01110867
301008
Bacteroidota
TTG
Gln
>WENV170467389
CEVE01133153
160572
Bacteroidota
GGG
Pro
>WENV170466639
CEVE01070219
451846
Bacteroidota
GCA
Cys
>WENV170466113
CEVE01022789
139231
Bacteroidota
GAC
Val
>WENV170466155
CEVE01025573
139231
Bacteroidota
GAC
Val
>WENV170467795
CEVE01274038
172819
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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