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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170477864
CEVJ01164253
411784
Bacteroidota
GCA
Cys
>WENV170477634
CEVJ01091878
147880
Bacteroidota
GGC
Ala
>WENV170477637
CEVJ01092087
172532
Bacteroidota
GTC
Asp
>WENV170477519
CEVJ01081443
236125
Bacteroidota
GAA
Phe
>WENV170477541
CEVJ01083941
236125
Bacteroidota
GAA
Phe
>WENV170477693
CEVJ01095425
236125
Bacteroidota
GAA
Phe
>WENV170477641
CEVJ01092160
169357
Bacteroidota
CAT
Met
>WENV170477241
CEVJ01050659
320640
Bacteroidota
TTG
Gln
>WENV170477475
CEVJ01077889
320640
Bacteroidota
TTG
Gln
>WENV170477593
CEVJ01088258
320640
Bacteroidota
TTG
Gln
>WENV170477296
CEVJ01057117
160686
Bacteroidota
CAT
Met
>WENV170476880
CEVJ01001317
259147
Bacteroidota
TTT
Lys
>WENV170477374
CEVJ01065394
290994
Bacteroidota
CAT
Met
>WENV170477830
CEVJ01148650
126712
Bacteroidota
GAC
Val
>WENV170477196
CEVJ01044877
193627
Bacteroidota
TCT
Arg
>WENV170477678
CEVJ01094866
165044
Bacteroidota
GTG
His
>WENV170477540
CEVJ01083594
145555
Bacteroidota
GTC
Asp
>WENV170476946
CEVJ01009927
240901
Bacteroidota
TTT
Lys
>WENV170476910
CEVJ01003669
240901
Bacteroidota
TTT
Lys
>WENV170476909
CEVJ01003669
240901
Bacteroidota
TTT
Lys
>WENV170477386
CEVJ01066979
185921
Bacteroidota
GTC
Asp
>WENV170477694
CEVJ01095454
179613
Bacteroidota
CAT
Met
>WENV170476954
CEVJ01010762
179613
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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