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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170513437
CEWA01003431
20025
Gammaproteobacteria
GGA
Ser
>WENV170514572
CEWA01095965
300945
Gammaproteobacteria
TGT
Thr
>WENV170513984
CEWA01044850
149035
Gammaproteobacteria
CCG
Arg
>WENV170515029
CEWA01206620
61925
Gammaproteobacteria
TAA
Leu
>WENV170514924
CEWA01193276
160030
Gammaproteobacteria
GGG
Pro
>WENV170514509
CEWA01092266
171935
Gammaproteobacteria
ACG
Arg
>WENV170513474
CEWA01006125
185163
Gammaproteobacteria
ACG
Arg
>WENV170513728
CEWA01026675
240642
Gammaproteobacteria
GTT
Asn
>WENV170513797
CEWA01031691
149036
Gammaproteobacteria
CCA
Trp
>WENV170514355
CEWA01080069
412799
Gammaproteobacteria
GCA
Cys
>WENV170514771
CEWA01151678
340801
Gammaproteobacteria
CCT
Arg
>WENV170514135
CEWA01058268
411766
Gammaproteobacteria
GCA
Cys
>WENV170513717
CEWA01025379
240084
Gammaproteobacteria
GGT
Thr
>WENV170514150
CEWA01059310
151889
Gammaproteobacteria
CAT
Met
>WENV170514549
CEWA01094801
128930
Gammaproteobacteria
GTC
Asp
>WENV170513695
CEWA01023929
149037
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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