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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170519999
CEWE01264154
237967
Gammaproteobacteria
TTT
Lys
>WENV170518618
CEWE01145572
313881
Gammaproteobacteria
GGC
Ala
>WENV170519784
CEWE01257900
199859
Gammaproteobacteria
CAT
Met
>WENV170519096
CEWE01203567
146435
Gammaproteobacteria
TGG
Pro
>WENV170519511
CEWE01241401
279385
Gammaproteobacteria
TTT
Lys
>WENV170517897
CEWE01068219
17426
Gammaproteobacteria
GCT
Ser
>WENV170518394
CEWE01120519
61925
Gammaproteobacteria
TAA
Leu
>WENV170520123
CEWE01345642
160030
Gammaproteobacteria
GGG
Pro
>WENV170519095
CEWE01203444
269248
Gammaproteobacteria
CCA
Trp
>WENV170517708
CEWE01055232
185163
Gammaproteobacteria
ACG
Arg
>WENV170519351
CEWE01228642
59211
Gammaproteobacteria
TAA
Leu
>WENV170519716
CEWE01254470
154268
Gammaproteobacteria
ACG
Arg
>WENV170517712
CEWE01055420
240642
Gammaproteobacteria
GTT
Asn
>WENV170519613
CEWE01248214
426403
Gammaproteobacteria
GCA
Cys
>WENV170519864
CEWE01261193
289927
Gammaproteobacteria
GAA
Phe
>WENV170517744
CEWE01058088
149038
Gammaproteobacteria
TGG
Pro
>WENV170517157
CEWE01014542
152301
Gammaproteobacteria
GAT
Ile
>WENV170520517
CEWE01517721
269152
Gammaproteobacteria
GTG
His
>WENV170517707
CEWE01055232
10767
Gammaproteobacteria
GCT
Ser
>WENV170518087
CEWE01088471
173040
Gammaproteobacteria
GAC
Val
>WENV170517465
CEWE01037353
341782
Gammaproteobacteria
TTG
Gln
>WENV170520009
CEWE01264184
311863
Gammaproteobacteria
GGC
Ala
>WENV170518409
CEWE01121748
250885
Gammaproteobacteria
TGC
Ala
>WENV170517745
CEWE01058088
154796
Gammaproteobacteria
TCT
Arg
>WENV170518055
CEWE01085039
128930
Gammaproteobacteria
GTC
Asp
>WENV170520116
CEWE01339730
243485
Gammaproteobacteria
TGT
Thr
>WENV170518353
CEWE01117618
237421
Gammaproteobacteria
TGT
Thr
>WENV170517328
CEWE01027228
237421
Gammaproteobacteria
TGT
Thr
>WENV170519081
CEWE01202154
163882
Gammaproteobacteria
GAC
Val
>WENV170518774
CEWE01161272
203054
Gammaproteobacteria
ACG
Arg
>WENV170518733
CEWE01157757
237159
Gammaproteobacteria
GTG
His
>WENV170519505
CEWE01240850
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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