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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170520898
CEWF01029091
34302
Alphaproteobacteria
TGA
Ser
>WENV170520832
CEWF01019078
370165
Alphaproteobacteria
TTC
Glu
>WENV170520809
CEWF01014707
259585
Alphaproteobacteria
CCA
Trp
>WENV170520798
CEWF01013212
130362
Alphaproteobacteria
CAA
Leu
>WENV170521284
CEWF01147727
169712
Alphaproteobacteria
TGG
Pro
>WENV170520753
CEWF01006108
159281
Alphaproteobacteria
GTG
His
>WENV170520741
CEWF01005289
469905
Alphaproteobacteria
CCC
Gly
>WENV170520765
CEWF01008624
159287
Alphaproteobacteria
CGG
Pro
>WENV170520828
CEWF01018592
369406
Alphaproteobacteria
GAC
Val
>WENV170520840
CEWF01020063
67024
Alphaproteobacteria
TAA
Leu
>WENV170520922
CEWF01034298
26236
Alphaproteobacteria
CGA
Ser
>WENV170521203
CEWF01126542
12053
Alphaproteobacteria
GCT
Ser
>WENV170521312
CEWF01150094
88722
Alphaproteobacteria
CAG
Leu
>WENV170520847
CEWF01020792
32799
Alphaproteobacteria
GGA
Ser
>WENV170520788
CEWF01012038
231929
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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