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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541919
CXPU01000017
190892
Actinomycetota
CAT
Met
>WENV170541931
CXPU01000037
293317
Actinomycetota
GGC
Ala
>WENV170541932
CXPU01000037
293317
Actinomycetota
GGC
Ala
>WENV170541924
CXPU01000028
322268
Actinomycetota
CGT
Thr
>WENV170541914
CXPU01000011
211952
Actinomycetota
ACG
Arg
>WENV170541915
CXPU01000011
211952
Actinomycetota
ACG
Arg
>WENV170541911
CXPU01000005
257345
Actinomycetota
CCT
Arg
>WENV170541953
CXPU01000108
238709
Actinomycetota
CAA
Leu
>WENV170541952
CXPU01000108
159159
Actinomycetota
TGG
Pro
>WENV170541944
CXPU01000067
49789
Actinomycetota
CGA
Ser
>WENV170541912
CXPU01000007
328213
Actinomycetota
GTT
Asn
>WENV170541940
CXPU01000053
218329
Actinomycetota
CTT
Lys
>WENV170541939
CXPU01000047
169995
Actinomycetota
GGG
Pro
>WENV170541929
CXPU01000033
49723
Actinomycetota
TGA
Ser
>WENV170541930
CXPU01000035
470684
Actinomycetota
CCC
Gly
>WENV170541949
CXPU01000096
131003
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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