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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543756
CXQY01000055
190892
Actinomycetota
CAT
Met
>WENV170543720
CXQY01000019
293317
Actinomycetota
GGC
Ala
>WENV170543721
CXQY01000019
293317
Actinomycetota
GGC
Ala
>WENV170543768
CXQY01000417
293317
Actinomycetota
GGC
Ala
>WENV170543772
CXQY01000545
293317
Actinomycetota
GGC
Ala
>WENV170543727
CXQY01000022
322268
Actinomycetota
CGT
Thr
>WENV170543722
CXQY01000019
211952
Actinomycetota
ACG
Arg
>WENV170543731
CXQY01000027
211952
Actinomycetota
ACG
Arg
>WENV170543764
CXQY01000325
211952
Actinomycetota
ACG
Arg
>WENV170543765
CXQY01000325
211952
Actinomycetota
ACG
Arg
>WENV170543709
CXQY01000007
257345
Actinomycetota
CCT
Arg
>WENV170543715
CXQY01000013
238709
Actinomycetota
CAA
Leu
>WENV170543716
CXQY01000013
159159
Actinomycetota
TGG
Pro
>WENV170543719
CXQY01000017
49789
Actinomycetota
CGA
Ser
>WENV170543710
CXQY01000008
328213
Actinomycetota
GTT
Asn
>WENV170543711
CXQY01000008
328213
Actinomycetota
GTT
Asn
>WENV170543754
CXQY01000045
328213
Actinomycetota
GTT
Asn
>WENV170543766
CXQY01000328
328213
Actinomycetota
GTT
Asn
>WENV170543767
CXQY01000328
328213
Actinomycetota
GTT
Asn
>WENV170543726
CXQY01000020
218329
Actinomycetota
CTT
Lys
>WENV170543737
CXQY01000029
169995
Actinomycetota
GGG
Pro
>WENV170543723
CXQY01000019
471398
Actinomycetota
TTG
Gln
>WENV170543747
CXQY01000033
49723
Actinomycetota
TGA
Ser
>WENV170543761
CXQY01000059
470684
Actinomycetota
CCC
Gly
>WENV170543714
CXQY01000013
131003
Actinomycetota
TAA
Leu
>WENV170543739
CXQY01000029
372017
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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