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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549725
CXVH01001416
235347
Actinomycetota
GGC
Ala
>WENV170549745
CXVH01002114
235347
Actinomycetota
GGC
Ala
>WENV170549726
CXVH01001439
144600
Actinomycetota
TGG
Pro
>WENV170549700
CXVH01000606
235092
Actinomycetota
CCG
Arg
>WENV170549697
CXVH01000548
235194
Actinomycetota
GTG
His
>WENV170549704
CXVH01000859
158720
Actinomycetota
ACG
Arg
>WENV170549766
CXVH01003433
158720
Actinomycetota
ACG
Arg
>WENV170549681
CXVH01000097
23370
Actinomycetota
GCT
Ser
>WENV170549767
CXVH01003585
338239
Actinomycetota
TTC
Glu
>WENV170549724
CXVH01001415
338239
Actinomycetota
TTC
Glu
>WENV170549687
CXVH01000300
44929
Actinomycetota
GGA
Ser
>WENV170549685
CXVH01000110
235101
Actinomycetota
TTT
Lys
>WENV170549677
CXVH01000037
145345
Actinomycetota
TAC
Val
>WENV170549744
CXVH01002051
235199
Actinomycetota
CAC
Val
>WENV170549741
CXVH01001966
235199
Actinomycetota
CAC
Val
>WENV170549706
CXVH01000897
235199
Actinomycetota
CAC
Val
>WENV170549709
CXVH01000938
413665
Actinomycetota
TTG
Gln
>WENV170549680
CXVH01000079
45154
Actinomycetota
TGA
Ser
>WENV170549734
CXVH01001646
144700
Actinomycetota
CAT
Met
>WENV170549727
CXVH01001470
243671
Actinomycetota
CTC
Glu
>WENV170549728
CXVH01001470
338148
Actinomycetota
CTG
Gln
>WENV170549735
CXVH01001705
235148
Actinomycetota
GTT
Asn
>WENV170549732
CXVH01001604
144825
Actinomycetota
CAT
Met
>WENV170549721
CXVH01001042
412399
Actinomycetota
CCC
Gly
>WENV170549703
CXVH01000808
119508
Actinomycetota
TAA
Leu
>WENV170549688
CXVH01000471
235348
Actinomycetota
CCT
Arg
>WENV170549720
CXVH01001014
113601
Actinomycetota
TAG
Leu
>WENV170549731
CXVH01001581
144595
Actinomycetota
CAA
Leu
>WENV170549719
CXVH01001014
235121
Actinomycetota
CGT
Thr
>WENV170549682
CXVH01000103
45852
Actinomycetota
CGA
Ser
>WENV170549765
CXVH01003088
80622
Actinomycetota
CAG
Leu
>WENV170549730
CXVH01001522
147734
Actinomycetota
GTC
Asp
>WENV170549686
CXVH01000211
147734
Actinomycetota
GTC
Asp
>WENV170549699
CXVH01000605
16222
Actinomycetota
GAG
Leu
>WENV170549733
CXVH01001646
95593
Actinomycetota
>WENV170549698
CXVH01000587
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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