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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549852
CXVJ01000013
235347
Actinomycetota
GGC
Ala
>WENV170549853
CXVJ01000013
235347
Actinomycetota
GGC
Ala
>WENV170549827
CXVJ01000002
166493
Actinomycetota
CTT
Lys
>WENV170549858
CXVJ01000013
144600
Actinomycetota
TGG
Pro
>WENV170549847
CXVJ01000008
235194
Actinomycetota
GTG
His
>WENV170549823
CXVJ01000002
273786
Actinomycetota
CGT
Thr
>WENV170549854
CXVJ01000013
158720
Actinomycetota
ACG
Arg
>WENV170549855
CXVJ01000013
158720
Actinomycetota
ACG
Arg
>WENV170549835
CXVJ01000004
144826
Actinomycetota
GGG
Pro
>WENV170549844
CXVJ01000006
23370
Actinomycetota
GCT
Ser
>WENV170549864
CXVJ01000023
174149
Actinomycetota
GAT
Ile
>WENV170549860
CXVJ01000019
338239
Actinomycetota
TTC
Glu
>WENV170549865
CXVJ01000023
235174
Actinomycetota
TGC
Ala
>WENV170549826
CXVJ01000002
235101
Actinomycetota
TTT
Lys
>WENV170549868
CXVJ01000041
356045
Actinomycetota
GAC
Val
>WENV170549832
CXVJ01000004
356045
Actinomycetota
GAC
Val
>WENV170549848
CXVJ01000008
145345
Actinomycetota
TAC
Val
>WENV170549869
CXVJ01000041
235199
Actinomycetota
CAC
Val
>WENV170549833
CXVJ01000004
235199
Actinomycetota
CAC
Val
>WENV170549822
CXVJ01000001
367535
Actinomycetota
CTG
Gln
>WENV170549857
CXVJ01000013
413665
Actinomycetota
TTG
Gln
>WENV170549846
CXVJ01000006
45154
Actinomycetota
TGA
Ser
>WENV170549828
CXVJ01000002
254857
Actinomycetota
CCG
Arg
>WENV170549843
CXVJ01000006
144700
Actinomycetota
CAT
Met
>WENV170549821
CXVJ01000001
243671
Actinomycetota
CTC
Glu
>WENV170549837
CXVJ01000004
235148
Actinomycetota
GTT
Asn
>WENV170549836
CXVJ01000004
235148
Actinomycetota
GTT
Asn
>WENV170549839
CXVJ01000005
144825
Actinomycetota
CAT
Met
>WENV170549862
CXVJ01000021
412399
Actinomycetota
CCC
Gly
>WENV170549859
CXVJ01000014
119508
Actinomycetota
TAA
Leu
>WENV170549840
CXVJ01000005
235348
Actinomycetota
CCT
Arg
>WENV170549824
CXVJ01000002
113601
Actinomycetota
TAG
Leu
>WENV170549851
CXVJ01000013
144595
Actinomycetota
CAA
Leu
>WENV170549820
CXVJ01000001
47164
Actinomycetota
GGA
Ser
>WENV170549845
CXVJ01000006
45852
Actinomycetota
CGA
Ser
>WENV170549863
CXVJ01000021
80622
Actinomycetota
CAG
Leu
>WENV170549856
CXVJ01000013
16222
Actinomycetota
GAG
Leu
>WENV170549842
CXVJ01000006
95593
Actinomycetota
>WENV170549849
CXVJ01000009
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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