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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180004706
FLRS01098122
16842
Bacillota
CGA
Ser
>WENV180004735
FLRS01120459
235693
Bacillota
GGT
Thr
>WENV180004496
FLRS01012180
246392
Bacillota
GTT
Asn
>WENV180004768
FLRS01147723
246392
Bacillota
GTT
Asn
>WENV180004472
FLRS01007766
37549
Bacillota
TAA
Leu
>WENV180004729
FLRS01117866
152047
Bacillota
GGG
Pro
>WENV180004562
FLRS01024050
241761
Bacillota
TAC
Val
>WENV180004636
FLRS01052374
419288
Bacillota
GGT
Thr
>WENV180004609
FLRS01041198
243646
Bacillota
GTT
Asn
>WENV180004535
FLRS01019522
243646
Bacillota
GTT
Asn
>WENV180004745
FLRS01129673
114002
Bacillota
CAA
Leu
>WENV180004664
FLRS01075071
114002
Bacillota
CAA
Leu
>WENV180004512
FLRS01015376
114002
Bacillota
CAA
Leu
>WENV180004574
FLRS01027511
342736
Bacillota
TTG
Gln
>WENV180004460
FLRS01006707
37437
Bacillota
TAA
Leu
>WENV180004495
FLRS01012180
340265
Bacillota
GCC
Gly
>WENV180004537
FLRS01019522
243612
Bacillota
TAC
Val
>WENV180004668
FLRS01077053
37551
Bacillota
CGA
Ser
>WENV180004738
FLRS01124853
147135
Bacillota
ACG
Arg
>WENV180004721
FLRS01106896
147135
Bacillota
ACG
Arg
>WENV180004575
FLRS01027511
248683
Bacillota
TTT
Lys
>WENV180004670
FLRS01080143
243399
Bacillota
CCA
Trp
>WENV180004471
FLRS01007766
419945
Bacillota
GCA
Cys
>WENV180004533
FLRS01017759
250349
Bacillota
GAA
Phe
>WENV180004736
FLRS01120459
152045
Bacillota
CAT
Met
>WENV180004532
FLRS01017759
235197
Bacillota
GTC
Asp
>WENV180004671
FLRS01080143
152051
Bacillota
ACG
Arg
>WENV180004640
FLRS01055089
243613
Bacillota
GTG
His
>WENV180004559
FLRS01023564
148495
Bacillota
TCT
Arg
>WENV180004687
FLRS01087736
152491
Bacillota
CAT
Met
>WENV180004723
FLRS01109217
413657
Bacillota
CCC
Gly
>WENV180004511
FLRS01015343
413657
Bacillota
CCC
Gly
>WENV180004644
FLRS01056729
273862
Bacillota
TGC
Ala
>WENV180004641
FLRS01055089
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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