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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180009405
FLSC01002584
81880
Gammaproteobacteria
GAG
Leu
>WENV180009376
FLSC01002148
30640
Gammaproteobacteria
GGA
Ser
>WENV180009377
FLSC01002148
30640
Gammaproteobacteria
GGA
Ser
>WENV180009906
FLSC01150808
30640
Gammaproteobacteria
GGA
Ser
>WENV180009971
FLSC01204454
30640
Gammaproteobacteria
GGA
Ser
>WENV180010102
FLSC01302804
3276
Gammaproteobacteria
>WENV180010243
FLSC01434512
150561
Gammaproteobacteria
ACG
Arg
>WENV180009483
FLSC01005163
397091
Gammaproteobacteria
TTG
Gln
>WENV180010249
FLSC01439172
397091
Gammaproteobacteria
TTG
Gln
>WENV180010250
FLSC01439172
397091
Gammaproteobacteria
TTG
Gln
>WENV180010251
FLSC01439172
397091
Gammaproteobacteria
TTG
Gln
>WENV180010382
FLSC01482919
397091
Gammaproteobacteria
TTG
Gln
>WENV180010383
FLSC01482919
397091
Gammaproteobacteria
TTG
Gln
>WENV180010037
FLSC01244800
268376
Gammaproteobacteria
CTT
Lys
>WENV180010054
FLSC01253561
268376
Gammaproteobacteria
CTT
Lys
>WENV180010273
FLSC01447734
268376
Gammaproteobacteria
CTT
Lys
>WENV180009476
FLSC01004588
90409
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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