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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170574305
FLYM01024714
206878
Gammaproteobacteria
CCT
Arg
>WENV170574062
FLYM01002781
275093
Gammaproteobacteria
GGT
Thr
>WENV170574207
FLYM01013801
298415
Gammaproteobacteria
TTG
Gln
>WENV170574209
FLYM01014037
10504
Gammaproteobacteria
GCT
Ser
>WENV170574225
FLYM01015467
290580
Gammaproteobacteria
GCC
Gly
>WENV170574468
FLYM01042443
179695
Gammaproteobacteria
CCT
Arg
>WENV170574249
FLYM01017697
323311
Gammaproteobacteria
CGC
Ala
>WENV170574146
FLYM01008808
159793
Gammaproteobacteria
CAT
Met
>WENV170574185
FLYM01011955
26283
Gammaproteobacteria
GCT
Ser
>WENV170574464
FLYM01041370
159608
Gammaproteobacteria
GGG
Pro
>WENV170574334
FLYM01026738
7997
Gammaproteobacteria
GCT
Ser
>WENV170574041
FLYM01000734
277439
Gammaproteobacteria
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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