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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180018009
FSXZ01001694
340609
Actinomycetota
GCC
Gly
>WENV180018020
FSXZ01002134
340609
Actinomycetota
GCC
Gly
>WENV180018038
FSXZ01002618
340609
Actinomycetota
GCC
Gly
>WENV180017972
FSXZ01000344
413566
Actinomycetota
CCC
Gly
>WENV180017971
FSXZ01000339
113907
Actinomycetota
GTA
Tyr
>WENV180018005
FSXZ01001647
44902
Actinomycetota
GGA
Ser
>WENV180018037
FSXZ01002605
44902
Actinomycetota
GGA
Ser
>WENV180018008
FSXZ01001682
262283
Actinomycetota
CTT
Lys
>WENV180018029
FSXZ01002337
262283
Actinomycetota
CTT
Lys
>WENV180018016
FSXZ01001956
413688
Actinomycetota
CCC
Gly
>WENV180017987
FSXZ01001225
151886
Actinomycetota
CGC
Ala
>WENV180018023
FSXZ01002208
163710
Actinomycetota
CGG
Pro
>WENV180018027
FSXZ01002309
366754
Actinomycetota
CTG
Gln
>WENV180018033
FSXZ01002436
80704
Actinomycetota
CAG
Leu
>WENV180017994
FSXZ01001573
338413
Actinomycetota
CCG
Arg
>WENV180017959
FSXZ01000092
412879
Actinomycetota
TCC
Gly
>WENV180018021
FSXZ01002134
413961
Actinomycetota
GCA
Cys
>WENV180018010
FSXZ01001694
413961
Actinomycetota
GCA
Cys
>WENV180017978
FSXZ01000963
279822
Actinomycetota
GTG
His
>WENV180018039
FSXZ01002618
338419
Actinomycetota
GAC
Val
>WENV180018025
FSXZ01002286
338419
Actinomycetota
GAC
Val
>WENV180018022
FSXZ01002134
338419
Actinomycetota
GAC
Val
>WENV180018031
FSXZ01002342
47989
Actinomycetota
GAG
Leu
>WENV180018047
FSXZ01003021
183544
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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