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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180023924
FTIF01004228
152292
Betaproteobacteria
TTG
Gln
>WENV180023949
FTIF01004944
152292
Betaproteobacteria
TTG
Gln
>WENV180023962
FTIF01005241
152292
Betaproteobacteria
TTG
Gln
>WENV180024187
FTIF01169036
152292
Betaproteobacteria
TTG
Gln
>WENV180024208
FTIF01262932
152292
Betaproteobacteria
TTG
Gln
>WENV180023772
FTIF01000162
145694
Betaproteobacteria
ACG
Arg
>WENV180024180
FTIF01145764
145694
Betaproteobacteria
ACG
Arg
>WENV180024033
FTIF01012003
59085
Betaproteobacteria
TAG
Leu
>WENV180024053
FTIF01018456
59085
Betaproteobacteria
TAG
Leu
>WENV180024130
FTIF01060505
59085
Betaproteobacteria
TAG
Leu
>WENV180024135
FTIF01063497
387094
Betaproteobacteria
GGT
Thr
>WENV180023892
FTIF01003478
154591
Betaproteobacteria
CAT
Met
>WENV180023986
FTIF01005701
154591
Betaproteobacteria
CAT
Met
>WENV180024046
FTIF01014702
154591
Betaproteobacteria
CAT
Met
>WENV180024060
FTIF01018963
154591
Betaproteobacteria
CAT
Met
>WENV180024190
FTIF01171278
154591
Betaproteobacteria
CAT
Met
>WENV180023858
FTIF01002064
153173
Betaproteobacteria
CAT
Met
>WENV180023982
FTIF01005435
153173
Betaproteobacteria
CAT
Met
>WENV180024090
FTIF01033733
153173
Betaproteobacteria
CAT
Met
>WENV180024137
FTIF01066906
153173
Betaproteobacteria
CAT
Met
>WENV180024196
FTIF01197033
45127
Betaproteobacteria
CGA
Ser
>WENV180024192
FTIF01177133
45127
Betaproteobacteria
CGA
Ser
>WENV180024091
FTIF01034051
45127
Betaproteobacteria
CGA
Ser
>WENV180024085
FTIF01032438
45127
Betaproteobacteria
CGA
Ser
>WENV180024045
FTIF01014565
45127
Betaproteobacteria
CGA
Ser
>WENV180023905
FTIF01003686
45127
Betaproteobacteria
CGA
Ser
>WENV180024177
FTIF01140805
283971
Betaproteobacteria
TAC
Val
>WENV180023950
FTIF01004961
283971
Betaproteobacteria
TAC
Val
>WENV180023929
FTIF01004390
283971
Betaproteobacteria
TAC
Val
>WENV180023894
FTIF01003516
283971
Betaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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