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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180034108
FTKM01680081
339403
Betaproteobacteria
TCT
Arg
>WENV180033920
FTKM01000903
152292
Betaproteobacteria
TTG
Gln
>WENV180033950
FTKM01009329
145694
Betaproteobacteria
ACG
Arg
>WENV180033951
FTKM01009329
145694
Betaproteobacteria
ACG
Arg
>WENV180034079
FTKM01557460
172608
Betaproteobacteria
TTG
Gln
>WENV180033993
FTKM01037384
68998
Betaproteobacteria
CAG
Leu
>WENV180033929
FTKM01001870
59425
Betaproteobacteria
TAG
Leu
>WENV180034104
FTKM01680079
16499
Betaproteobacteria
GGA
Ser
>WENV180034014
FTKM01083671
59085
Betaproteobacteria
TAG
Leu
>WENV180033919
FTKM01000866
348115
Betaproteobacteria
CCT
Arg
>WENV180034056
FTKM01304814
387094
Betaproteobacteria
GGT
Thr
>WENV180033953
FTKM01010584
30465
Betaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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