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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170647238
JQIA01016894
341865
Alphaproteobacteria
GTT
Asn
>WENV170646738
JQIA01002484
343492
Alphaproteobacteria
TTC
Glu
>WENV170646889
JQIA01005101
361070
Alphaproteobacteria
GCC
Gly
>WENV170647106
JQIA01011064
23671
Alphaproteobacteria
CGA
Ser
>WENV170647338
JQIA01021422
150677
Alphaproteobacteria
GTC
Asp
>WENV170647019
JQIA01008240
419996
Alphaproteobacteria
GCA
Cys
>WENV170646586
JQIA01000107
281594
Alphaproteobacteria
TGT
Thr
>WENV170647600
JQIA01039908
28682
Alphaproteobacteria
GGA
Ser
>WENV170646632
JQIA01000643
28682
Alphaproteobacteria
GGA
Ser
>WENV170646627
JQIA01000562
192195
Alphaproteobacteria
GTC
Asp
>WENV170646902
JQIA01005567
340106
Alphaproteobacteria
GCC
Gly
>WENV170646730
JQIA01002270
146915
Alphaproteobacteria
CAT
Met
>WENV170646562
JQIA01000048
294405
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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