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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170648161
JRHI01000006
366446
Actinomycetota
GCA
Cys
>WENV170648806
JRHI01002459
385600
Actinomycetota
GCC
Gly
>WENV170648788
JRHI01002265
144903
Actinomycetota
GTC
Asp
>WENV170648863
JRHI01003050
8521
Actinomycetota
GCT
Ser
>WENV170648164
JRHI01000006
359855
Actinomycetota
CAC
Val
>WENV170648188
JRHI01000023
266899
Actinomycetota
ACG
Arg
>WENV170648307
JRHI01000141
421725
Actinomycetota
TTG
Gln
>WENV170648755
JRHI01001905
44897
Actinomycetota
GAG
Leu
>WENV170648334
JRHI01000174
152190
Actinomycetota
GAT
Ile
>WENV170648399
JRHI01000283
269803
Actinomycetota
CGC
Ala
>WENV170648790
JRHI01002265
185606
Actinomycetota
CGG
Pro
>WENV170648578
JRHI01000894
179547
Actinomycetota
GGG
Pro
>WENV170648194
JRHI01000030
339857
Actinomycetota
CTG
Gln
>WENV170648336
JRHI01000181
237445
Actinomycetota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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