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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170682590
LFIK01000447
117444
Bacteroidota
GTA
Tyr
>WENV170682592
LFIK01000447
391466
Bacteroidota
GGT
Thr
>WENV170682593
LFIK01000447
310118
Bacteroidota
CCA
Trp
>WENV170682744
LFIK01001046
158985
Bacteroidota
GTC
Asp
>WENV170682865
LFIK01001968
64800
Bacteroidota
GAG
Leu
>WENV170683024
LFIK01003581
24600
Bacteroidota
GGA
Ser
>WENV170683122
LFIK01005140
160351
Bacteroidota
TCT
Arg
>WENV170683168
LFIK01005892
325477
Bacteroidota
TTG
Gln
>WENV170683631
LFIK01017167
50545
Bacteroidota
TAA
Leu
>WENV170683656
LFIK01018102
214919
Bacteroidota
GTG
His
>WENV170683672
LFIK01018913
161476
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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