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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170693141
LGOV01101416
277731
Bacteroidota
>WENV170693142
LGOV01101416
277731
Bacteroidota
>WENV170693147
LGOV01106592
159893
Bacteroidota
TCT
Arg
>WENV170692999
LGOV01059278
183186
Bacteroidota
TCT
Arg
>WENV170693096
LGOV01083584
259222
Bacteroidota
TCC
Gly
>WENV170692252
LGOV01001684
266737
Bacteroidota
TTT
Lys
>WENV170692310
LGOV01002692
169923
Bacteroidota
CAT
Met
>WENV170693145
LGOV01103785
162517
Bacteroidota
GTT
Asn
>WENV170692893
LGOV01042381
50019
Bacteroidota
TGA
Ser
>WENV170692767
LGOV01027996
153255
Bacteroidota
TGG
Pro
>WENV170693001
LGOV01059278
138967
Bacteroidota
TGG
Pro
>WENV170693097
LGOV01083584
373542
Bacteroidota
GGT
Thr
>WENV170692801
LGOV01031772
162516
Bacteroidota
TGC
Ala
>WENV170692733
LGOV01025257
158528
Bacteroidota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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