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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170692212
LGOV01000921
125783
Gammaproteobacteria
GTA
Tyr
>WENV170692213
LGOV01000921
448350
Gammaproteobacteria
TCC
Gly
>WENV170692214
LGOV01000921
369546
Gammaproteobacteria
GGT
Thr
>WENV170692299
LGOV01002474
159507
Gammaproteobacteria
GTC
Asp
>WENV170692300
LGOV01002474
159507
Gammaproteobacteria
GTC
Asp
>WENV170692302
LGOV01002474
159507
Gammaproteobacteria
GTC
Asp
>WENV170692396
LGOV01005533
391217
Gammaproteobacteria
TTG
Gln
>WENV170692449
LGOV01007723
307111
Gammaproteobacteria
TAC
Val
>WENV170692464
LGOV01008411
10504
Gammaproteobacteria
GCT
Ser
>WENV170692487
LGOV01009707
64905
Gammaproteobacteria
TAA
Leu
>WENV170692507
LGOV01010986
370515
Gammaproteobacteria
GTG
His
>WENV170692505
LGOV01010986
159514
Gammaproteobacteria
TCT
Arg
>WENV170692529
LGOV01011474
64904
Gammaproteobacteria
CAA
Leu
>WENV170692728
LGOV01024462
159505
Gammaproteobacteria
CGG
Pro
>WENV170692742
LGOV01025882
220289
Gammaproteobacteria
CAT
Met
>WENV170692792
LGOV01031401
170513
Gammaproteobacteria
GAC
Val
>WENV170692805
LGOV01032307
105274
Gammaproteobacteria
TAG
Leu
>WENV170692804
LGOV01032307
159512
Gammaproteobacteria
GGG
Pro
>WENV170693103
LGOV01084983
159506
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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