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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170692344
LGOV01003783
250271
Thermodesulfobacteriota
TGC
Ala
>WENV170692732
LGOV01025243
167749
Thermodesulfobacteriota
CCA
Trp
>WENV170692895
LGOV01042604
167749
Thermodesulfobacteriota
CCA
Trp
>WENV170692979
LGOV01055863
167749
Thermodesulfobacteriota
CCA
Trp
>WENV170692339
LGOV01003753
174262
Thermodesulfobacteriota
GTC
Asp
>WENV170692341
LGOV01003753
174262
Thermodesulfobacteriota
GTC
Asp
>WENV170692425
LGOV01007166
174262
Thermodesulfobacteriota
GTC
Asp
>WENV170692658
LGOV01019889
152132
Thermodesulfobacteriota
CAT
Met
>WENV170692695
LGOV01022585
152132
Thermodesulfobacteriota
CAT
Met
>WENV170692729
LGOV01024842
152132
Thermodesulfobacteriota
CAT
Met
>WENV170692869
LGOV01039102
45804
Thermodesulfobacteriota
CGA
Ser
>WENV170692557
LGOV01013625
413572
Thermodesulfobacteriota
GCA
Cys
>WENV170692663
LGOV01020465
413572
Thermodesulfobacteriota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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