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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170692339
LGOV01003753
163229
Thermodesulfobacteriota
GTC
Asp
>WENV170692341
LGOV01003753
163229
Thermodesulfobacteriota
GTC
Asp
>WENV170692425
LGOV01007166
163229
Thermodesulfobacteriota
GTC
Asp
>WENV170692489
LGOV01009896
275578
Thermodesulfobacteriota
TTT
Lys
>WENV170692658
LGOV01019889
163232
Thermodesulfobacteriota
CAT
Met
>WENV170692691
LGOV01022255
50985
Thermodesulfobacteriota
GGA
Ser
>WENV170692695
LGOV01022585
163232
Thermodesulfobacteriota
CAT
Met
>WENV170692729
LGOV01024842
163232
Thermodesulfobacteriota
CAT
Met
>WENV170692740
LGOV01025701
275578
Thermodesulfobacteriota
TTT
Lys
>WENV170692869
LGOV01039102
50278
Thermodesulfobacteriota
CGA
Ser
>WENV170692895
LGOV01042604
163230
Thermodesulfobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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