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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170715511
LQAB01003680
144620
Thermodesulfobacteriota
GGG
Pro
>WENV170715576
LQAB01006417
144620
Thermodesulfobacteriota
GGG
Pro
>WENV170715862
LQAB01018022
144620
Thermodesulfobacteriota
GGG
Pro
>WENV170715698
LQAB01011345
151846
Thermodesulfobacteriota
CCA
Trp
>WENV170715495
LQAB01002455
246751
Thermodesulfobacteriota
CAC
Val
>WENV170715527
LQAB01004344
246751
Thermodesulfobacteriota
CAC
Val
>WENV170715530
LQAB01004388
246751
Thermodesulfobacteriota
CAC
Val
>WENV170715661
LQAB01009179
246751
Thermodesulfobacteriota
CAC
Val
>WENV170715709
LQAB01012045
246751
Thermodesulfobacteriota
CAC
Val
>WENV170715892
LQAB01019239
246751
Thermodesulfobacteriota
CAC
Val
>WENV170715521
LQAB01004035
173826
Thermodesulfobacteriota
CAT
Met
>WENV170715568
LQAB01005867
173826
Thermodesulfobacteriota
CAT
Met
>WENV170715773
LQAB01014734
173826
Thermodesulfobacteriota
CAT
Met
>WENV170715916
LQAB01020321
173826
Thermodesulfobacteriota
CAT
Met
>WENV170715747
LQAB01013475
179273
Thermodesulfobacteriota
GTC
Asp
>WENV170715572
LQAB01006044
156452
Thermodesulfobacteriota
TTC
Glu
>WENV170715782
LQAB01015260
248567
Thermodesulfobacteriota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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