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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170732322
LULI01034307
412259
Alphaproteobacteria
CTG
Gln
>WENV170731335
LULI01000051
237493
Alphaproteobacteria
CCA
Trp
>WENV170731344
LULI01000076
412798
Alphaproteobacteria
CTG
Gln
>WENV170732314
LULI01033559
80917
Alphaproteobacteria
CAG
Leu
>WENV170732330
LULI01034870
59361
Alphaproteobacteria
GAG
Leu
>WENV170731419
LULI01000233
412917
Alphaproteobacteria
TCC
Gly
>WENV170731446
LULI01000365
237489
Alphaproteobacteria
CAT
Met
>WENV170731391
LULI01000150
159305
Alphaproteobacteria
GTC
Asp
>WENV170732117
LULI01015348
282595
Alphaproteobacteria
CCA
Trp
>WENV170732421
LULI01049938
435528
Alphaproteobacteria
GCA
Cys
>WENV170732230
LULI01024605
95928
Alphaproteobacteria
TAG
Leu
>WENV170731320
LULI01000018
95928
Alphaproteobacteria
TAG
Leu
>WENV170732433
LULI01052296
74116
Alphaproteobacteria
CAG
Leu
>WENV170731383
LULI01000125
74116
Alphaproteobacteria
CAG
Leu
>WENV170731454
LULI01000414
258175
Alphaproteobacteria
CGC
Ala
>WENV170731332
LULI01000047
167926
Alphaproteobacteria
CAT
Met
>WENV170731843
LULI01005120
242540
Alphaproteobacteria
TGC
Ala
>WENV170732359
LULI01039331
348781
Alphaproteobacteria
GAA
Phe
>WENV170732412
LULI01048243
266073
Alphaproteobacteria
TTT
Lys
>WENV170732102
LULI01014742
369678
Alphaproteobacteria
GGT
Thr
>WENV170731418
LULI01000233
369678
Alphaproteobacteria
GGT
Thr
>WENV170731450
LULI01000389
29831
Alphaproteobacteria
TGA
Ser
>WENV170732337
LULI01035497
21074
Alphaproteobacteria
GGA
Ser
>WENV170731308
LULI01000009
21074
Alphaproteobacteria
GGA
Ser
>WENV170731697
LULI01002138
377327
Alphaproteobacteria
GCC
Gly
>WENV170731329
LULI01000040
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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