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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170731636
LULI01001622
144929
Cyanobacteriota
CAT
Met
>WENV170732289
LULI01030874
144929
Cyanobacteriota
CAT
Met
>WENV170731731
LULI01002519
145761
Cyanobacteriota
GTC
Asp
>WENV170732194
LULI01021859
145761
Cyanobacteriota
GTC
Asp
>WENV170731955
LULI01008578
306125
Cyanobacteriota
GTG
His
>WENV170731860
LULI01005509
164907
Cyanobacteriota
GGG
Pro
>WENV170731577
LULI01001084
37357
Cyanobacteriota
TAA
Leu
>WENV170731512
LULI01000645
96363
Cyanobacteriota
TAG
Leu
>WENV170731519
LULI01000677
310428
Cyanobacteriota
TGC
Ala
>WENV170732309
LULI01032912
149253
Cyanobacteriota
ACG
Arg
>WENV170731562
LULI01001004
363933
Cyanobacteriota
GTT
Asn
>WENV170731883
LULI01006017
23971
Cyanobacteriota
TGA
Ser
>WENV170731668
LULI01001868
23971
Cyanobacteriota
TGA
Ser
>WENV170731581
LULI01001111
411836
Cyanobacteriota
TCC
Gly
>WENV170731809
LULI01004401
240100
Cyanobacteriota
CAT
Met
>WENV170731601
LULI01001272
95762
Cyanobacteriota
AAG
Leu
>WENV170731786
LULI01003990
188100
Cyanobacteriota
CCG
Arg
>WENV170732428
LULI01050749
341034
Cyanobacteriota
GGT
Thr
>WENV170732062
LULI01012700
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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