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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170742771
LULV01000560
366531
Cyanobacteriota
TTG
Gln
>WENV170743095
LULV01009385
109616
Cyanobacteriota
GTA
Tyr
>WENV170742804
LULV01000888
145761
Cyanobacteriota
GTC
Asp
>WENV170742874
LULV01001944
306125
Cyanobacteriota
GTG
His
>WENV170743001
LULV01005751
164907
Cyanobacteriota
GGG
Pro
>WENV170742685
LULV01000152
37357
Cyanobacteriota
TAA
Leu
>WENV170742717
LULV01000208
96363
Cyanobacteriota
TAG
Leu
>WENV170742726
LULV01000283
310428
Cyanobacteriota
TGC
Ala
>WENV170743028
LULV01006746
149253
Cyanobacteriota
ACG
Arg
>WENV170742911
LULV01002941
23971
Cyanobacteriota
TGA
Ser
>WENV170742734
LULV01000341
411836
Cyanobacteriota
TCC
Gly
>WENV170742763
LULV01000544
240100
Cyanobacteriota
CAT
Met
>WENV170742799
LULV01000852
95762
Cyanobacteriota
AAG
Leu
>WENV170742773
LULV01000583
188100
Cyanobacteriota
CCG
Arg
>WENV170743219
LULV01018235
341034
Cyanobacteriota
GGT
Thr
>WENV170743096
LULV01009385
341034
Cyanobacteriota
GGT
Thr
>WENV170743057
LULV01007608
341034
Cyanobacteriota
GGT
Thr
>WENV170742961
LULV01004081
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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