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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180111790
OAPO01000175
366531
Cyanobacteriota
TTG
Gln
>WENV180111833
OAPO01003050
109616
Cyanobacteriota
GTA
Tyr
>WENV180111946
OAPO01020590
267489
Cyanobacteriota
GGC
Ala
>WENV180112090
OAPO01077231
164907
Cyanobacteriota
GGG
Pro
>WENV180111787
OAPO01000004
310428
Cyanobacteriota
TGC
Ala
>WENV180112038
OAPO01054243
149253
Cyanobacteriota
ACG
Arg
>WENV180112046
OAPO01055652
363933
Cyanobacteriota
GTT
Asn
>WENV180111860
OAPO01007070
411836
Cyanobacteriota
TCC
Gly
>WENV180111807
OAPO01001465
252089
Cyanobacteriota
GTG
His
>WENV180111789
OAPO01000165
240100
Cyanobacteriota
CAT
Met
>WENV180111889
OAPO01011339
95762
Cyanobacteriota
AAG
Leu
>WENV180111839
OAPO01004062
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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