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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180124199
OASX01003500
235146
Actinomycetota
CGT
Thr
>WENV180124250
OASX01004614
235347
Actinomycetota
GGC
Ala
>WENV180124251
OASX01004614
235347
Actinomycetota
GGC
Ala
>WENV180124295
OASX01006044
235347
Actinomycetota
GGC
Ala
>WENV180124296
OASX01006044
235347
Actinomycetota
GGC
Ala
>WENV180124067
OASX01001619
166493
Actinomycetota
CTT
Lys
>WENV180124237
OASX01004313
144600
Actinomycetota
TGG
Pro
>WENV180124369
OASX01009839
235194
Actinomycetota
GTG
His
>WENV180124378
OASX01009844
235194
Actinomycetota
GTG
His
>WENV180124545
OASX01024947
273786
Actinomycetota
CGT
Thr
>WENV180124268
OASX01004902
158720
Actinomycetota
ACG
Arg
>WENV180124267
OASX01004902
158720
Actinomycetota
ACG
Arg
>WENV180124186
OASX01003195
158720
Actinomycetota
ACG
Arg
>WENV180124185
OASX01003195
158720
Actinomycetota
ACG
Arg
>WENV180124332
OASX01007618
411601
Actinomycetota
CCC
Gly
>WENV180124218
OASX01003739
144826
Actinomycetota
GGG
Pro
>WENV180124189
OASX01003247
144826
Actinomycetota
GGG
Pro
>WENV180124354
OASX01009076
23370
Actinomycetota
GCT
Ser
>WENV180123963
OASX01000811
23370
Actinomycetota
GCT
Ser
>WENV180124214
OASX01003669
174149
Actinomycetota
GAT
Ile
>WENV180124249
OASX01004607
338239
Actinomycetota
TTC
Glu
>WENV180124216
OASX01003733
338239
Actinomycetota
TTC
Glu
>WENV180124215
OASX01003669
235174
Actinomycetota
TGC
Ala
>WENV180123995
OASX01000976
121510
Actinomycetota
TAA
Leu
>WENV180124138
OASX01002394
356045
Actinomycetota
GAC
Val
>WENV180124341
OASX01007984
44855
Actinomycetota
TGA
Ser
>WENV180124339
OASX01007777
145345
Actinomycetota
TAC
Val
>WENV180124139
OASX01002394
235199
Actinomycetota
CAC
Val
>WENV180124121
OASX01002232
44862
Actinomycetota
CGA
Ser
>WENV180124298
OASX01006052
367535
Actinomycetota
CTG
Gln
>WENV180124165
OASX01002723
413665
Actinomycetota
TTG
Gln
>WENV180124073
OASX01001714
45154
Actinomycetota
TGA
Ser
>WENV180124573
OASX01033044
254857
Actinomycetota
CCG
Arg
>WENV180124575
OASX01033510
144700
Actinomycetota
CAT
Met
>WENV180124297
OASX01006052
243671
Actinomycetota
CTC
Glu
>WENV180124193
OASX01003322
235148
Actinomycetota
GTT
Asn
>WENV180124321
OASX01006888
144825
Actinomycetota
CAT
Met
>WENV180124286
OASX01005653
144825
Actinomycetota
CAT
Met
>WENV180124398
OASX01011187
412399
Actinomycetota
CCC
Gly
>WENV180124554
OASX01027090
119508
Actinomycetota
TAA
Leu
>WENV180124190
OASX01003251
235348
Actinomycetota
CCT
Arg
>WENV180124062
OASX01001522
235348
Actinomycetota
CCT
Arg
>WENV180124546
OASX01024947
113601
Actinomycetota
TAG
Leu
>WENV180124282
OASX01005463
144595
Actinomycetota
CAA
Leu
>WENV180124083
OASX01001799
144595
Actinomycetota
CAA
Leu
>WENV180124202
OASX01003599
47164
Actinomycetota
GGA
Ser
>WENV180124063
OASX01001544
47164
Actinomycetota
GGA
Ser
>WENV180124098
OASX01001925
45852
Actinomycetota
CGA
Ser
>WENV180124568
OASX01029052
17009
Actinomycetota
GAG
Leu
>WENV180124452
OASX01014382
80622
Actinomycetota
CAG
Leu
>WENV180124140
OASX01002405
80622
Actinomycetota
CAG
Leu
>WENV180124183
OASX01003129
243162
Actinomycetota
GTT
Asn
>WENV180124182
OASX01003129
243162
Actinomycetota
GTT
Asn
>WENV180124181
OASX01003129
243162
Actinomycetota
GTT
Asn
>WENV180124180
OASX01003036
144660
Actinomycetota
TAC
Val
>WENV180124574
OASX01033510
95593
Actinomycetota
>WENV180124134
OASX01002344
144823
Actinomycetota
TCT
Arg
>WENV180124120
OASX01002219
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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