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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180129230
OATC01000086
235146
Actinomycetota
CGT
Thr
>WENV180129234
OATC01000102
235347
Actinomycetota
GGC
Ala
>WENV180129235
OATC01000102
235347
Actinomycetota
GGC
Ala
>WENV180129227
OATC01000080
166493
Actinomycetota
CTT
Lys
>WENV180129286
OATC01000250
144600
Actinomycetota
TGG
Pro
>WENV180129253
OATC01000168
235194
Actinomycetota
GTG
His
>WENV180129238
OATC01000119
158720
Actinomycetota
ACG
Arg
>WENV180129239
OATC01000119
158720
Actinomycetota
ACG
Arg
>WENV180129241
OATC01000127
144826
Actinomycetota
GGG
Pro
>WENV180129201
OATC01000058
23370
Actinomycetota
GCT
Ser
>WENV180129269
OATC01000223
338239
Actinomycetota
TTC
Glu
>WENV180129192
OATC01000050
235174
Actinomycetota
TGC
Ala
>WENV180129198
OATC01000055
235101
Actinomycetota
TTT
Lys
>WENV180129236
OATC01000105
121510
Actinomycetota
TAA
Leu
>WENV180129216
OATC01000066
235199
Actinomycetota
CAC
Val
>WENV180129207
OATC01000063
235199
Actinomycetota
CAC
Val
>WENV180129202
OATC01000058
44862
Actinomycetota
CGA
Ser
>WENV180129233
OATC01000102
413665
Actinomycetota
TTG
Gln
>WENV180129248
OATC01000146
254857
Actinomycetota
CCG
Arg
>WENV180129200
OATC01000058
144700
Actinomycetota
CAT
Met
>WENV180129196
OATC01000055
243671
Actinomycetota
CTC
Glu
>WENV180129197
OATC01000055
338148
Actinomycetota
CTG
Gln
>WENV180129179
OATC01000034
144825
Actinomycetota
CAT
Met
>WENV180129261
OATC01000187
412399
Actinomycetota
CCC
Gly
>WENV180129180
OATC01000034
235348
Actinomycetota
CCT
Arg
>WENV180129229
OATC01000086
113601
Actinomycetota
TAG
Leu
>WENV180129297
OATC01000437
144595
Actinomycetota
CAA
Leu
>WENV180129228
OATC01000086
235121
Actinomycetota
CGT
Thr
>WENV180129195
OATC01000055
47164
Actinomycetota
GGA
Ser
>WENV180129208
OATC01000064
17009
Actinomycetota
GAG
Leu
>WENV180129292
OATC01000321
80622
Actinomycetota
CAG
Leu
>WENV180129270
OATC01000223
147734
Actinomycetota
GTC
Asp
>WENV180129285
OATC01000247
243162
Actinomycetota
GTT
Asn
>WENV180129258
OATC01000180
243162
Actinomycetota
GTT
Asn
>WENV180129231
OATC01000092
144660
Actinomycetota
TAC
Val
>WENV180129199
OATC01000058
95593
Actinomycetota
>WENV180129189
OATC01000046
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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