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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180192882
OAZW01000006
235097
Bacteroidota
TTT
Lys
>WENV180193077
OAZW01000089
235097
Bacteroidota
TTT
Lys
>WENV180192889
OAZW01000008
235102
Bacteroidota
CGT
Thr
>WENV180193324
OAZW01000377
144657
Bacteroidota
CGG
Pro
>WENV180193036
OAZW01000072
338155
Bacteroidota
CTC
Glu
>WENV180192885
OAZW01000007
150845
Bacteroidota
GTC
Asp
>WENV180193810
OAZW01014108
153993
Bacteroidota
GAT
Ile
>WENV180192959
OAZW01000032
339341
Bacteroidota
GGT
Thr
>WENV180193498
OAZW01000748
343138
Bacteroidota
CCT
Arg
>WENV180193532
OAZW01000913
58715
Bacteroidota
GAG
Leu
>WENV180193148
OAZW01000154
338486
Bacteroidota
CAT
Met
>WENV180193147
OAZW01000154
338486
Bacteroidota
CAT
Met
>WENV180193583
OAZW01001099
80835
Bacteroidota
GTA
Tyr
>WENV180192949
OAZW01000031
80835
Bacteroidota
GTA
Tyr
>WENV180193191
OAZW01000197
237247
Bacteroidota
TTT
Lys
>WENV180192876
OAZW01000003
237247
Bacteroidota
TTT
Lys
>WENV180192888
OAZW01000008
338124
Bacteroidota
CCG
Arg
>WENV180193646
OAZW01001499
235203
Bacteroidota
TTT
Lys
>WENV180193496
OAZW01000739
235203
Bacteroidota
TTT
Lys
>WENV180193245
OAZW01000245
235203
Bacteroidota
TTT
Lys
>WENV180193098
OAZW01000107
235203
Bacteroidota
TTT
Lys
>WENV180193056
OAZW01000080
235203
Bacteroidota
TTT
Lys
>WENV180193034
OAZW01000072
235203
Bacteroidota
TTT
Lys
>WENV180192977
OAZW01000044
235203
Bacteroidota
TTT
Lys
>WENV180193070
OAZW01000085
238121
Bacteroidota
CTT
Lys
>WENV180193069
OAZW01000085
238121
Bacteroidota
CTT
Lys
>WENV180193231
OAZW01000230
126641
Bacteroidota
TAC
Val
>WENV180193230
OAZW01000230
126641
Bacteroidota
TAC
Val
>WENV180192989
OAZW01000051
126641
Bacteroidota
TAC
Val
>WENV180192975
OAZW01000043
126641
Bacteroidota
TAC
Val
>WENV180192939
OAZW01000027
126641
Bacteroidota
TAC
Val
>WENV180192912
OAZW01000016
126641
Bacteroidota
TAC
Val
>WENV180193533
OAZW01000914
338132
Bacteroidota
GCA
Cys
>WENV180193386
OAZW01000481
338132
Bacteroidota
GCA
Cys
>WENV180193067
OAZW01000083
338132
Bacteroidota
GCA
Cys
>WENV180192962
OAZW01000035
338132
Bacteroidota
GCA
Cys
>WENV180193140
OAZW01000146
144933
Bacteroidota
TCT
Arg
>WENV180193101
OAZW01000112
144933
Bacteroidota
TCT
Arg
>WENV180193076
OAZW01000087
144933
Bacteroidota
TCT
Arg
>WENV180193863
OAZW01033284
149691
Bacteroidota
GTT
Asn
>WENV180193397
OAZW01000489
149691
Bacteroidota
GTT
Asn
>WENV180193396
OAZW01000489
149691
Bacteroidota
GTT
Asn
>WENV180193096
OAZW01000105
149691
Bacteroidota
GTT
Asn
>WENV180193095
OAZW01000105
149691
Bacteroidota
GTT
Asn
>WENV180192901
OAZW01000011
149691
Bacteroidota
GTT
Asn
>WENV180192900
OAZW01000011
149691
Bacteroidota
GTT
Asn
>WENV180192945
OAZW01000029
144656
Bacteroidota
GTG
His
>WENV180193313
OAZW01000339
235207
Bacteroidota
CAT
Met
>WENV180193605
OAZW01001286
144659
Bacteroidota
GTG
His
>WENV180193057
OAZW01000081
235180
Bacteroidota
CCA
Trp
>WENV180192960
OAZW01000032
235180
Bacteroidota
CCA
Trp
>WENV180193384
OAZW01000473
144596
Bacteroidota
GGC
Ala
>WENV180193209
OAZW01000215
144596
Bacteroidota
GGC
Ala
>WENV180193673
OAZW01002165
80607
Bacteroidota
GTA
Tyr
>WENV180193382
OAZW01000467
80607
Bacteroidota
GTA
Tyr
>WENV180193261
OAZW01000260
80607
Bacteroidota
GTA
Tyr
>WENV180193211
OAZW01000218
80607
Bacteroidota
GTA
Tyr
>WENV180193055
OAZW01000079
80607
Bacteroidota
GTA
Tyr
>WENV180192884
OAZW01000006
80607
Bacteroidota
GTA
Tyr
>WENV180193013
OAZW01000063
113604
Bacteroidota
>WENV180193010
OAZW01000063
113604
Bacteroidota
>WENV180193567
OAZW01000986
80614
Bacteroidota
>WENV180193234
OAZW01000231
80614
Bacteroidota
>WENV180192958
OAZW01000032
80614
Bacteroidota
>WENV180193259
OAZW01000260
144590
Bacteroidota
GTT
Asn
>WENV180193258
OAZW01000260
144590
Bacteroidota
GTT
Asn
>WENV180193251
OAZW01000247
95559
Bacteroidota
TAG
Leu
>WENV180193637
OAZW01001443
144655
Bacteroidota
GGC
Ala
>WENV180192947
OAZW01000030
95875
Bacteroidota
TAG
Leu
>WENV180193187
OAZW01000190
151121
Bacteroidota
CAT
Met
>WENV180192938
OAZW01000025
151121
Bacteroidota
CAT
Met
>WENV180193378
OAZW01000461
240012
Bacteroidota
CCC
Gly
>WENV180193031
OAZW01000069
44852
Bacteroidota
TAA
Leu
>WENV180193262
OAZW01000260
338165
Bacteroidota
GGT
Thr
>WENV180193212
OAZW01000218
338165
Bacteroidota
GGT
Thr
>WENV180193415
OAZW01000516
239647
Bacteroidota
TTT
Lys
>WENV180193093
OAZW01000103
239647
Bacteroidota
TTT
Lys
>WENV180192925
OAZW01000019
239647
Bacteroidota
TTT
Lys
>WENV180192905
OAZW01000013
239647
Bacteroidota
TTT
Lys
>WENV180193433
OAZW01000574
240620
Bacteroidota
GCC
Gly
>WENV180192936
OAZW01000025
240620
Bacteroidota
GCC
Gly
>WENV180193602
OAZW01001257
16224
Bacteroidota
GGA
Ser
>WENV180193296
OAZW01000313
16224
Bacteroidota
GGA
Ser
>WENV180193141
OAZW01000149
16224
Bacteroidota
GGA
Ser
>WENV180193116
OAZW01000129
16220
Bacteroidota
GGA
Ser
>WENV180192981
OAZW01000046
16220
Bacteroidota
GGA
Ser
>WENV180193252
OAZW01000248
338125
Bacteroidota
CCT
Arg
>WENV180193097
OAZW01000106
338125
Bacteroidota
CCT
Arg
>WENV180192961
OAZW01000033
338125
Bacteroidota
CCT
Arg
>WENV180192899
OAZW01000011
338125
Bacteroidota
CCT
Arg
>WENV180193530
OAZW01000913
235129
Bacteroidota
GCC
Gly
>WENV180192956
OAZW01000032
235129
Bacteroidota
GCC
Gly
>WENV180192954
OAZW01000032
235129
Bacteroidota
GCC
Gly
>WENV180193462
OAZW01000667
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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