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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180213743
OBAO01006370
235146
Actinomycetota
CGT
Thr
>WENV180213993
OBAO01021374
235347
Actinomycetota
GGC
Ala
>WENV180213598
OBAO01003335
235153
Actinomycetota
CCT
Arg
>WENV180213814
OBAO01008385
201717
Actinomycetota
CTT
Lys
>WENV180214219
OBAO01070442
158720
Actinomycetota
ACG
Arg
>WENV180213593
OBAO01003303
245301
Actinomycetota
GCC
Gly
>WENV180213595
OBAO01003303
245301
Actinomycetota
GCC
Gly
>WENV180213596
OBAO01003303
245301
Actinomycetota
GCC
Gly
>WENV180213930
OBAO01015765
411601
Actinomycetota
CCC
Gly
>WENV180214186
OBAO01056614
144826
Actinomycetota
GGG
Pro
>WENV180213936
OBAO01016350
23370
Actinomycetota
GCT
Ser
>WENV180213677
OBAO01004942
174149
Actinomycetota
GAT
Ile
>WENV180214079
OBAO01033287
338239
Actinomycetota
TTC
Glu
>WENV180213678
OBAO01004942
235174
Actinomycetota
TGC
Ala
>WENV180214312
OBAO01104676
356045
Actinomycetota
GAC
Val
>WENV180214061
OBAO01030136
153948
Actinomycetota
GGG
Pro
>WENV180214313
OBAO01104676
235199
Actinomycetota
CAC
Val
>WENV180213797
OBAO01007748
44862
Actinomycetota
CGA
Ser
>WENV180213946
OBAO01016867
367535
Actinomycetota
CTG
Gln
>WENV180214236
OBAO01074385
413665
Actinomycetota
TTG
Gln
>WENV180213837
OBAO01009428
144636
Actinomycetota
GAT
Ile
>WENV180213945
OBAO01016867
295695
Actinomycetota
CTC
Glu
>WENV180214107
OBAO01037051
53078
Actinomycetota
GGA
Ser
>WENV180214381
OBAO01182503
338139
Actinomycetota
GTT
Asn
>WENV180213990
OBAO01021074
235348
Actinomycetota
CCT
Arg
>WENV180213937
OBAO01016414
113601
Actinomycetota
TAG
Leu
>WENV180213980
OBAO01020362
144595
Actinomycetota
CAA
Leu
>WENV180213641
OBAO01004188
414234
Actinomycetota
CTG
Gln
>WENV180214167
OBAO01048892
17009
Actinomycetota
GAG
Leu
>WENV180214065
OBAO01031090
80622
Actinomycetota
CAG
Leu
>WENV180213665
OBAO01004879
158513
Actinomycetota
TGG
Pro
>WENV180213594
OBAO01003303
412834
Actinomycetota
GCA
Cys
>WENV180213976
OBAO01019866
243162
Actinomycetota
GTT
Asn
>WENV180214038
OBAO01026844
144660
Actinomycetota
TAC
Val
>WENV180214101
OBAO01036549
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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