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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180222093
OBBC01006150
243025
Bacteroidota
CAT
Met
>WENV180222121
OBBC01010707
339341
Bacteroidota
GGT
Thr
>WENV180222232
OBBC01034910
58715
Bacteroidota
GAG
Leu
>WENV180222231
OBBC01034910
59689
Bacteroidota
CAG
Leu
>WENV180222257
OBBC01047055
436206
Bacteroidota
TTG
Gln
>WENV180222069
OBBC01001849
20893
Bacteroidota
GGA
Ser
>WENV180222087
OBBC01004040
301449
Bacteroidota
CGG
Pro
>WENV180222265
OBBC01052271
144659
Bacteroidota
GTG
His
>WENV180222098
OBBC01008456
80607
Bacteroidota
GTA
Tyr
>WENV180222206
OBBC01026214
113604
Bacteroidota
>WENV180222120
OBBC01010707
80614
Bacteroidota
>WENV180222221
OBBC01030774
338165
Bacteroidota
GGT
Thr
>WENV180222078
OBBC01002938
338165
Bacteroidota
GGT
Thr
>WENV180222040
OBBC01000129
338165
Bacteroidota
GGT
Thr
>WENV180222071
OBBC01002322
16220
Bacteroidota
GGA
Ser
>WENV180222079
OBBC01003062
338125
Bacteroidota
CCT
Arg
>WENV180222230
OBBC01034910
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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