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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180223555
OBBG01055823
24650
Bacillota
TAA
Leu
>WENV180223586
OBBG01073837
178679
Bacillota
CAT
Met
>WENV180223492
OBBG01035236
339890
Bacillota
TTG
Gln
>WENV180223474
OBBG01030061
156189
Bacillota
GAT
Ile
>WENV180223511
OBBG01041247
235154
Bacillota
GTT
Asn
>WENV180223489
OBBG01034678
144577
Bacillota
GAT
Ile
>WENV180223508
OBBG01041030
246023
Bacillota
TGC
Ala
>WENV180223399
OBBG01014107
340802
Bacillota
TTG
Gln
>WENV180223332
OBBG01002423
37083
Bacillota
TGA
Ser
>WENV180223392
OBBG01012141
235117
Bacillota
TAC
Val
>WENV180223394
OBBG01012141
235079
Bacillota
GAA
Phe
>WENV180223507
OBBG01041030
201704
Bacillota
GAT
Ile
>WENV180223398
OBBG01014107
144610
Bacillota
GTG
His
>WENV180223432
OBBG01019907
419639
Bacillota
GCA
Cys
>WENV180223323
OBBG01002423
301896
Bacillota
TAC
Val
>WENV180223524
OBBG01044896
245386
Bacillota
CCA
Trp
>WENV180223335
OBBG01002423
154711
Bacillota
TGG
Pro
>WENV180223490
OBBG01035236
147674
Bacillota
TCT
Arg
>WENV180223531
OBBG01047007
21693
Bacillota
GCT
Ser
>WENV180223431
OBBG01019907
344240
Bacillota
GCC
Gly
>WENV180223506
OBBG01039626
198135
Bacillota
GAT
Ile
>WENV180223429
OBBG01019907
196632
Bacillota
GTC
Asp
>WENV180223505
OBBG01039626
299139
Bacillota
TGC
Ala
>WENV180223430
OBBG01019907
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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