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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180235594
OBCU01000158
235097
Bacteroidota
TTT
Lys
>WENV180235606
OBCU01000178
235097
Bacteroidota
TTT
Lys
>WENV180235652
OBCU01000237
235097
Bacteroidota
TTT
Lys
>WENV180235401
OBCU01000008
235102
Bacteroidota
CGT
Thr
>WENV180235569
OBCU01000131
235102
Bacteroidota
CGT
Thr
>WENV180235454
OBCU01000031
144657
Bacteroidota
CGG
Pro
>WENV180235657
OBCU01000246
243025
Bacteroidota
CAT
Met
>WENV180235655
OBCU01000243
338155
Bacteroidota
CTC
Glu
>WENV180235963
OBCU01018649
339341
Bacteroidota
GGT
Thr
>WENV180235499
OBCU01000056
343138
Bacteroidota
CCT
Arg
>WENV180235445
OBCU01000027
58715
Bacteroidota
GAG
Leu
>WENV180235869
OBCU01002913
95618
Bacteroidota
TAG
Leu
>WENV180235536
OBCU01000086
338486
Bacteroidota
CAT
Met
>WENV180235409
OBCU01000014
338486
Bacteroidota
CAT
Met
>WENV180235512
OBCU01000065
48053
Bacteroidota
TGA
Ser
>WENV180235496
OBCU01000054
48053
Bacteroidota
TGA
Ser
>WENV180235844
OBCU01001754
48053
Bacteroidota
TGA
Ser
>WENV180235789
OBCU01000821
48053
Bacteroidota
TGA
Ser
>WENV180235653
OBCU01000239
48053
Bacteroidota
TGA
Ser
>WENV180235580
OBCU01000142
48053
Bacteroidota
TGA
Ser
>WENV180235523
OBCU01000076
48053
Bacteroidota
TGA
Ser
>WENV180235948
OBCU01015841
415410
Bacteroidota
TTG
Gln
>WENV180235818
OBCU01001283
415410
Bacteroidota
TTG
Gln
>WENV180235562
OBCU01000116
415410
Bacteroidota
TTG
Gln
>WENV180235528
OBCU01000083
415410
Bacteroidota
TTG
Gln
>WENV180235981
OBCU01025794
411543
Bacteroidota
CTG
Gln
>WENV180235451
OBCU01000031
59689
Bacteroidota
CAG
Leu
>WENV180235444
OBCU01000027
59689
Bacteroidota
CAG
Leu
>WENV180235473
OBCU01000037
80835
Bacteroidota
GTA
Tyr
>WENV180235498
OBCU01000054
338124
Bacteroidota
CCG
Arg
>WENV180235488
OBCU01000046
338124
Bacteroidota
CCG
Arg
>WENV180235534
OBCU01000085
235203
Bacteroidota
TTT
Lys
>WENV180235446
OBCU01000028
235203
Bacteroidota
TTT
Lys
>WENV180235502
OBCU01000057
238121
Bacteroidota
CTT
Lys
>WENV180235903
OBCU01006092
338132
Bacteroidota
GCA
Cys
>WENV180235734
OBCU01000465
338132
Bacteroidota
GCA
Cys
>WENV180235666
OBCU01000267
338132
Bacteroidota
GCA
Cys
>WENV180235592
OBCU01000155
338132
Bacteroidota
GCA
Cys
>WENV180235556
OBCU01000112
338132
Bacteroidota
GCA
Cys
>WENV180235398
OBCU01000008
338132
Bacteroidota
GCA
Cys
>WENV180235504
OBCU01000057
45423
Bacteroidota
TGA
Ser
>WENV180235503
OBCU01000057
45423
Bacteroidota
TGA
Ser
>WENV180235546
OBCU01000101
58714
Bacteroidota
CAA
Leu
>WENV180235840
OBCU01001590
144933
Bacteroidota
TCT
Arg
>WENV180235570
OBCU01000133
144656
Bacteroidota
GTG
His
>WENV180235875
OBCU01003347
235207
Bacteroidota
CAT
Met
>WENV180235680
OBCU01000292
235207
Bacteroidota
CAT
Met
>WENV180235525
OBCU01000081
144659
Bacteroidota
GTG
His
>WENV180235552
OBCU01000107
235180
Bacteroidota
CCA
Trp
>WENV180235455
OBCU01000031
235180
Bacteroidota
CCA
Trp
>WENV180235930
OBCU01011007
144596
Bacteroidota
GGC
Ala
>WENV180235832
OBCU01001440
144596
Bacteroidota
GGC
Ala
>WENV180236082
OBCU01101741
80607
Bacteroidota
GTA
Tyr
>WENV180235801
OBCU01000961
80607
Bacteroidota
GTA
Tyr
>WENV180235670
OBCU01000274
80607
Bacteroidota
GTA
Tyr
>WENV180235481
OBCU01000041
80607
Bacteroidota
GTA
Tyr
>WENV180235773
OBCU01000696
113604
Bacteroidota
>WENV180236093
OBCU01101989
80614
Bacteroidota
>WENV180235538
OBCU01000090
80614
Bacteroidota
>WENV180235526
OBCU01000081
80614
Bacteroidota
>WENV180235476
OBCU01000037
154643
Bacteroidota
CAT
Met
>WENV180236103
OBCU01102795
144590
Bacteroidota
GTT
Asn
>WENV180235603
OBCU01000168
95559
Bacteroidota
TAG
Leu
>WENV180235678
OBCU01000285
419272
Bacteroidota
CTG
Gln
>WENV180235484
OBCU01000042
419272
Bacteroidota
CTG
Gln
>WENV180235788
OBCU01000819
144655
Bacteroidota
GGC
Ala
>WENV180235501
OBCU01000056
338164
Bacteroidota
TTC
Glu
>WENV180235500
OBCU01000056
338164
Bacteroidota
TTC
Glu
>WENV180235665
OBCU01000264
95875
Bacteroidota
TAG
Leu
>WENV180235893
OBCU01005242
338314
Bacteroidota
CCT
Arg
>WENV180235495
OBCU01000053
240012
Bacteroidota
CCC
Gly
>WENV180235702
OBCU01000375
44852
Bacteroidota
TAA
Leu
>WENV180235494
OBCU01000053
147439
Bacteroidota
TCT
Arg
>WENV180235410
OBCU01000015
411550
Bacteroidota
CTG
Gln
>WENV180235542
OBCU01000098
338165
Bacteroidota
GGT
Thr
>WENV180235555
OBCU01000109
353927
Bacteroidota
TTC
Glu
>WENV180235654
OBCU01000243
23696
Bacteroidota
GCT
Ser
>WENV180235425
OBCU01000019
414426
Bacteroidota
CTG
Gln
>WENV180235833
OBCU01001488
16224
Bacteroidota
GGA
Ser
>WENV180235787
OBCU01000801
16224
Bacteroidota
GGA
Ser
>WENV180235700
OBCU01000366
16220
Bacteroidota
GGA
Ser
>WENV180235878
OBCU01003888
338125
Bacteroidota
CCT
Arg
>WENV180235514
OBCU01000066
338125
Bacteroidota
CCT
Arg
>WENV180235693
OBCU01000330
235129
Bacteroidota
GCC
Gly
>WENV180235600
OBCU01000164
235129
Bacteroidota
GCC
Gly
>WENV180235443
OBCU01000027
235129
Bacteroidota
GCC
Gly
>WENV180235807
OBCU01001044
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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