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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180236231
OBCV01000701
235097
Bacteroidota
TTT
Lys
>WENV180236158
OBCV01000146
235102
Bacteroidota
CGT
Thr
>WENV180236244
OBCV01001060
243025
Bacteroidota
CAT
Met
>WENV180236295
OBCV01002408
126965
Bacteroidota
GGG
Pro
>WENV180236377
OBCV01006045
17323
Bacteroidota
GGA
Ser
>WENV180236226
OBCV01000576
48053
Bacteroidota
TGA
Ser
>WENV180236240
OBCV01000838
48053
Bacteroidota
TGA
Ser
>WENV180236387
OBCV01006271
48053
Bacteroidota
TGA
Ser
>WENV180236162
OBCV01000149
415410
Bacteroidota
TTG
Gln
>WENV180236324
OBCV01003469
344692
Bacteroidota
GGT
Thr
>WENV180236494
OBCV01019899
341950
Bacteroidota
>WENV180236151
OBCV01000124
338124
Bacteroidota
CCG
Arg
>WENV180236353
OBCV01004631
338132
Bacteroidota
GCA
Cys
>WENV180236410
OBCV01007515
181746
Bacteroidota
GGC
Ala
>WENV180236173
OBCV01000212
144656
Bacteroidota
GTG
His
>WENV180236148
OBCV01000117
235207
Bacteroidota
CAT
Met
>WENV180236541
OBCV01029469
80607
Bacteroidota
GTA
Tyr
>WENV180236195
OBCV01000311
80607
Bacteroidota
GTA
Tyr
>WENV180236188
OBCV01000266
80607
Bacteroidota
GTA
Tyr
>WENV180236254
OBCV01001289
113604
Bacteroidota
>WENV180236206
OBCV01000377
154643
Bacteroidota
CAT
Met
>WENV180236522
OBCV01024883
144590
Bacteroidota
GTT
Asn
>WENV180236259
OBCV01001302
144590
Bacteroidota
GTT
Asn
>WENV180236165
OBCV01000163
95559
Bacteroidota
TAG
Leu
>WENV180236128
OBCV01000032
419272
Bacteroidota
CTG
Gln
>WENV180236323
OBCV01003436
144655
Bacteroidota
GGC
Ala
>WENV180236183
OBCV01000247
44852
Bacteroidota
TAA
Leu
>WENV180236707
OBCV01125575
338165
Bacteroidota
GGT
Thr
>WENV180236130
OBCV01000032
132360
Bacteroidota
GGG
Pro
>WENV180236449
OBCV01010678
19317
Bacteroidota
GGA
Ser
>WENV180236315
OBCV01002944
23696
Bacteroidota
GCT
Ser
>WENV180236299
OBCV01002602
414426
Bacteroidota
CTG
Gln
>WENV180236123
OBCV01000015
16224
Bacteroidota
GGA
Ser
>WENV180236129
OBCV01000032
16220
Bacteroidota
GGA
Ser
>WENV180236217
OBCV01000520
338125
Bacteroidota
CCT
Arg
>WENV180236421
OBCV01008052
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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