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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180238584
OBDA01005796
119475
Actinomycetota
TAA
Leu
>WENV180238597
OBDA01006569
235153
Actinomycetota
CCT
Arg
>WENV180238724
OBDA01022030
37070
Actinomycetota
CGA
Ser
>WENV180238998
OBDA01140043
235092
Actinomycetota
CCG
Arg
>WENV180238693
OBDA01015959
162208
Actinomycetota
TAC
Val
>WENV180238536
OBDA01003918
16219
Actinomycetota
GCT
Ser
>WENV180238539
OBDA01003982
235174
Actinomycetota
TGC
Ala
>WENV180238526
OBDA01003189
235101
Actinomycetota
TTT
Lys
>WENV180238568
OBDA01004921
144625
Actinomycetota
GTC
Asp
>WENV180238839
OBDA01046171
16223
Actinomycetota
GAG
Leu
>WENV180238569
OBDA01004922
144593
Actinomycetota
TAT
Ile
>WENV180238824
OBDA01041185
144636
Actinomycetota
GAT
Ile
>WENV180238670
OBDA01013336
98279
Actinomycetota
GTA
Tyr
>WENV180238601
OBDA01006676
338148
Actinomycetota
CTG
Gln
>WENV180238727
OBDA01022472
235148
Actinomycetota
GTT
Asn
>WENV180238857
OBDA01053846
176456
Actinomycetota
TCT
Arg
>WENV180238819
OBDA01040627
144907
Actinomycetota
GGG
Pro
>WENV180238746
OBDA01025429
411554
Actinomycetota
CCC
Gly
>WENV180238739
OBDA01024840
113601
Actinomycetota
TAG
Leu
>WENV180238744
OBDA01025252
144595
Actinomycetota
CAA
Leu
>WENV180238580
OBDA01005466
145343
Actinomycetota
GGG
Pro
>WENV180238759
OBDA01026989
235149
Actinomycetota
CCT
Arg
>WENV180238477
OBDA01001277
240009
Actinomycetota
GGC
Ala
>WENV180238879
OBDA01062248
414234
Actinomycetota
CTG
Gln
>WENV180238738
OBDA01024840
235121
Actinomycetota
CGT
Thr
>WENV180238509
OBDA01002406
144635
Actinomycetota
TGG
Pro
>WENV180238872
OBDA01058203
80622
Actinomycetota
CAG
Leu
>WENV180238582
OBDA01005731
44851
Actinomycetota
TGA
Ser
>WENV180238502
OBDA01002006
412834
Actinomycetota
GCA
Cys
>WENV180238540
OBDA01003982
235173
Actinomycetota
GGC
Ala
>WENV180238551
OBDA01004474
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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